Cow genome map
| Conread name: | rcki26_b12.y1 |
| Conread position: | 1-162 |
| Cow position: | chr7:8052827-8052666 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-361 |
| Cow position: | chr7:14187604-14187243 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 244 |
| Conread position: | 13-355 |
| Cow position: | chr7:10449137-10448791 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 175, 196 |
| Conread position: | 22-354 |
| Cow position: | chr7:19912667-19912333 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 227 |
| Conread position: | 22-357 |
| Cow position: | chr7:194021-193680 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 169, 227 |
| Conread position: | 24-386 |
| Cow position: | chr7:46823337-46823690 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 262 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 57, 8 |
| Conread position: | 33-299 |
| Cow position: | chr7:11419483-11419220 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 154, 101 |
| Conread position: | 33-299 |
| Cow position: | chr7:39795764-39796030 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 158, 209 |
| Conread position: | 33-308 |
| Cow position: | chr7:758952-758680 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 225, 151 |
| Conread position: | 33-359 |
| Cow position: | chr7:1366789-1366456 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 140, 217 |
| Conread position: | 33-382 |
| Cow position: | chr7:54712082-54712435 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 138 |
| Conread position: | 34-294 |
| Cow position: | chr7:6057796-6058059 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 34-294 |
| Cow position: | chr7:64180350-64180610 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 212, 222 |
| Conread position: | 34-351 |
| Cow position: | chr7:46857287-46856974 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 225 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 224, 114 |
| Conread position: | 34-371 |
| Cow position: | chr7:23569073-23568733 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 218 |
| Conread position: | 34-371 |
| Cow position: | chr7:38081827-38082161 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 85 |
| Conread position: | 34-371 |
| Cow position: | chr7:46148545-46148861 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 154, 36 |
| Conread position: | 34-371 |
| Cow position: | chr7:57911275-57911612 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 215 |
| Conread position: | 34-382 |
| Cow position: | chr7:15608062-15608425 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 102, 41 |
| Conread position: | 34-386 |
| Cow position: | chr7:23646275-23646627 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 75 |
| Conread position: | 34-386 |
| Cow position: | chr7:32894586-32894228 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 251 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 140, 218 |
| Conread position: | 34-386 |
| Cow position: | chr7:58362601-58362973 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 53, 101 |
| Conread position: | 34-387 |
| Cow position: | chr7:22357820-22357462 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 7 |
| Conread position: | 34-387 |
| Cow position: | chr7:48243344-48243693 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 153 |
| Conread position: | 34-388 |
| Cow position: | chr7:2923309-2923669 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 146 |
| Conread position: | 34-388 |
| Cow position: | chr7:52718972-52718615 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 112, 10 |
| Conread position: | 35-319 |
| Cow position: | chr7:61601701-61601428 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 11, 108 |
| Conread position: | 35-322 |
| Cow position: | chr7:62544254-62543951 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 112, 23 |
| Conread position: | 35-331 |
| Cow position: | chr7:29301083-29300795 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 272, 71 |
| Conread position: | 35-356 |
| Cow position: | chr7:27136160-27136492 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 77, 222 |
| Conread position: | 35-364 |
| Cow position: | chr7:3336871-3336553 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 153, 118 |
| Conread position: | 35-367 |
| Cow position: | chr7:1321221-1320904 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 231, 98 |
| Conread position: | 35-381 |
| Cow position: | chr7:4418791-4418446 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 159, 103 |
| Conread position: | 35-382 |
| Cow position: | chr7:52294803-52295140 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 246 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 266, 150 |
| Conread position: | 35-386 |
| Cow position: | chr7:63771571-63771925 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 159 |
| Conread position: | 35-387 |
| Cow position: | chr7:53053723-53053383 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 155, 71 |
| Conread position: | 40-329 |
| Cow position: | chr7:20779812-20780112 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 101, 53 |
| Conread position: | 40-337 |
| Cow position: | chr7:30276406-30276706 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 148, 209 |
| Conread position: | 40-364 |
| Cow position: | chr7:17816432-17816748 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 123 |
| Conread position: | 40-381 |
| Cow position: | chr7:39929953-39930309 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 251 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 13, 195 |
| Conread position: | 40-381 |
| Cow position: | chr7:40570941-40571287 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 209 |
| Conread position: | 41-329 |
| Cow position: | chr7:4452276-4452563 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 139, 89 |
| Conread position: | 44-359 |
| Cow position: | chr7:27127687-27127367 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 222 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 147, 92 |
| Conread position: | 44-382 |
| Cow position: | chr7:41131631-41131290 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 149, 42 |
| Conread position: | 45-299 |
| Cow position: | chr7:68867787-68868038 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 142, 134 |
| Conread position: | 48-303 |
| Cow position: | chr7:28057434-28057179 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 139, 165 |
| Conread position: | 55-393 |
| Cow position: | chr7:53552252-53551918 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 239 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 133, 50 |
| Conread position: | 64-364 |
| Cow position: | chr7:10513015-10512713 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 124, 203 |
| Conread position: | 78-376 |
| Cow position: | chr7:23679881-23679581 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 110, 51 |
| Conread position: | 79-361 |
| Cow position: | chr7:62732899-62733180 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 67, 74 |
| Conread position: | 79-381 |
| Cow position: | chr7:39325458-39325749 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 108, 50 |
| Conread position: | 87-263 |
| Cow position: | chr7:56668986-56668809 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 104, 165 |
| Conread position: | 91-381 |
| Cow position: | chr7:40067374-40067676 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 221 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 52, 159 |
| Conread position: | 93-359 |
| Cow position: | chr7:40283670-40283395 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 12 |
| Conread position: | 97-363 |
| Cow position: | chr7:59844032-59843757 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 8, 122 |
| Conread position: | 105-329 |
| Cow position: | chr7:47503396-47503614 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 19, 138 |
| Conread position: | 105-335 |
| Cow position: | chr7:57244349-57244122 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 83, 46 |
| Conread position: | 115-386 |
| Cow position: | chr7:26911686-26911419 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 73, 17 |
| Conread position: | 120-329 |
| Cow position: | chr7:11160248-11160037 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 69, 129 |
| Conread position: | 124-371 |
| Cow position: | chr7:48722148-48721897 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 64, 125 |
| Conread position: | 125-380 |
| Cow position: | chr7:36278052-36278307 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 117 |
| Conread position: | 126-387 |
| Cow position: | chr7:45331304-45331559 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 64, 126 |
| Conread position: | 128-300 |
| Cow position: | chr7:40894282-40894455 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 121 |
| Conread position: | 132-364 |
| Cow position: | chr7:13928389-13928157 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 54, 110 |
| Conread position: | 132-382 |
| Cow position: | chr7:39415670-39415924 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 56, 110 |
| Conread position: | 141-364 |
| Cow position: | chr7:37951955-37952179 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 47, 18 |
| Conread position: | 142-367 |
| Cow position: | chr7:64102633-64102407 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 47, 59 |
| Conread position: | 148-382 |
| Cow position: | chr7:34568981-34569207 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 40, 101 |
| Conread position: | 150-371 |
| Cow position: | chr7:27283462-27283688 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 100 |
| Conread position: | 154-368 |
| Cow position: | chr7:42894238-42894448 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 34, 76 |
| Conread position: | 154-371 |
| Cow position: | chr7:22793134-22793355 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 34, 57 |
| Conread position: | 154-386 |
| Cow position: | chr7:48406713-48406475 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 33, 95 |
| Conread position: | 155-381 |
| Cow position: | chr7:5913991-5914218 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 34, 94 |
| Conread position: | 162-408 |
| Cow position: | chr7:41315643-41315391 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 26, 90 |
Show alignments to all cow chromosomes.