Cow genome map


           Conread name:
           rcki26_b12.y1
        

               Conread position:
               1-162
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-361
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 244
               

               Conread position:
               13-355
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               175, 196
               

               Conread position:
               22-354
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 227
               

               Conread position:
               22-357
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               169, 227
               

               Conread position:
               24-386
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               262
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               57, 8
               

               Conread position:
               33-299
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               154, 101
               

               Conread position:
               33-299
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               158, 209
               

               Conread position:
               33-308
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               225, 151
               

               Conread position:
               33-359
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               229
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               140, 217
               

               Conread position:
               33-382
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 138
               

               Conread position:
               34-294
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               34-294
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               212, 222
               

               Conread position:
               34-351
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               225
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               224, 114
               

               Conread position:
               34-371
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 218
               

               Conread position:
               34-371
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 85
               

               Conread position:
               34-371
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               154, 36
               

               Conread position:
               34-371
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 215
               

               Conread position:
               34-382
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               102, 41
               

               Conread position:
               34-386
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 75
               

               Conread position:
               34-386
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               251
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               140, 218
               

               Conread position:
               34-386
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               53, 101
               

               Conread position:
               34-387
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 7
               

               Conread position:
               34-387
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 153
               

               Conread position:
               34-388
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 146
               

               Conread position:
               34-388
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               112, 10
               

               Conread position:
               35-319
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               11, 108
               

               Conread position:
               35-322
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               112, 23
               

               Conread position:
               35-331
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               272, 71
               

               Conread position:
               35-356
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               77, 222
               

               Conread position:
               35-364
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               153, 118
               

               Conread position:
               35-367
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               231, 98
               

               Conread position:
               35-381
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               159, 103
               

               Conread position:
               35-382
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               246
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               266, 150
               

               Conread position:
               35-386
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 159
               

               Conread position:
               35-387
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               155, 71
               

               Conread position:
               40-329
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               101, 53
               

               Conread position:
               40-337
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               148, 209
               

               Conread position:
               40-364
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               267, 123
               

               Conread position:
               40-381
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               251
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               13, 195
               

               Conread position:
               40-381
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 209
               

               Conread position:
               41-329
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               139, 89
               

               Conread position:
               44-359
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               222
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               147, 92
               

               Conread position:
               44-382
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               149, 42
               

               Conread position:
               45-299
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               142, 134
               

               Conread position:
               48-303
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               139, 165
               

               Conread position:
               55-393
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               239
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               133, 50
               

               Conread position:
               64-364
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               124, 203
               

               Conread position:
               78-376
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               110, 51
               

               Conread position:
               79-361
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               67, 74
               

               Conread position:
               79-381
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               218
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               108, 50
               

               Conread position:
               87-263
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               104, 165
               

               Conread position:
               91-381
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               221
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               52, 159
               

               Conread position:
               93-359
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 12
               

               Conread position:
               97-363
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               8, 122
               

               Conread position:
               105-329
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               19, 138
               

               Conread position:
               105-335
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               83, 46
               

               Conread position:
               115-386
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               73, 17
               

               Conread position:
               120-329
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               69, 129
               

               Conread position:
               124-371
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               64, 125
               

               Conread position:
               125-380
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               9, 117
               

               Conread position:
               126-387
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               64, 126
               

               Conread position:
               128-300
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               62, 121
               

               Conread position:
               132-364
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               54, 110
               

               Conread position:
               132-382
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               56, 110
               

               Conread position:
               141-364
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               47, 18
               

               Conread position:
               142-367
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               47, 59
               

               Conread position:
               148-382
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               40, 101
               

               Conread position:
               150-371
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 100
               

               Conread position:
               154-368
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               34, 76
               

               Conread position:
               154-371
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               34, 57
               

               Conread position:
               154-386
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               33, 95
               

               Conread position:
               155-381
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               34, 94
               

               Conread position:
               162-408
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               26, 90
               
Show alignments to all cow chromosomes.