Cow genome map
| Conread name: | rcki26_b12.y1 |
| Conread position: | 31-329 |
| Cow position: | chr8:5449237-5448944 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 211 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 235, 9 |
| Conread position: | 32-364 |
| Cow position: | chr8:11605972-11606295 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 8 |
| Conread position: | 33-311 |
| Cow position: | chr8:53320611-53320891 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 8 |
| Conread position: | 33-359 |
| Cow position: | chr8:23752501-23752832 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 20, 96 |
| Conread position: | 34-316 |
| Cow position: | chr8:60488992-60488711 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 129 |
| Conread position: | 34-331 |
| Cow position: | chr8:10337390-10337094 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 110, 7 |
| Conread position: | 34-338 |
| Cow position: | chr8:45245377-45245077 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 72 |
| Conread position: | 34-340 |
| Cow position: | chr8:51318607-51318910 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 224, 214 |
| Conread position: | 34-355 |
| Cow position: | chr8:50949402-50949734 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 44, 95 |
| Conread position: | 34-357 |
| Cow position: | chr8:28884446-28884791 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 243 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 48, 231 |
| Conread position: | 34-364 |
| Cow position: | chr8:16297123-16296785 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 215 |
| Conread position: | 34-364 |
| Cow position: | chr8:36648811-36648488 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 239 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 224, 44 |
| Conread position: | 34-364 |
| Cow position: | chr8:51578897-51579234 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 221 |
| Conread position: | 34-364 |
| Cow position: | chr8:56824386-56824050 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 103, 20 |
| Conread position: | 34-371 |
| Cow position: | chr8:28229833-28229489 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 154, 100 |
| Conread position: | 34-381 |
| Cow position: | chr8:4924199-4924551 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 216 |
| Conread position: | 34-382 |
| Cow position: | chr8:16972894-16972540 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 144 |
| Conread position: | 34-386 |
| Cow position: | chr8:18730074-18730436 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 7 |
| Conread position: | 34-387 |
| Cow position: | chr8:5485241-5484880 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 63 |
| Conread position: | 34-387 |
| Cow position: | chr8:47752280-47751925 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 100 |
| Conread position: | 34-394 |
| Cow position: | chr8:24980328-24980692 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 251 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 110, 192 |
| Conread position: | 34-394 |
| Cow position: | chr8:32621360-32620997 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 19 |
| Conread position: | 35-295 |
| Cow position: | chr8:32967207-32967472 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 107, 179 |
| Conread position: | 35-299 |
| Cow position: | chr8:6438506-6438243 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 156, 97 |
| Conread position: | 35-307 |
| Cow position: | chr8:61098407-61098135 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 106, 150 |
| Conread position: | 35-361 |
| Cow position: | chr8:9640990-9641320 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 215 |
| Conread position: | 35-364 |
| Cow position: | chr8:45071015-45071339 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 34 |
| Conread position: | 35-364 |
| Cow position: | chr8:53642795-53642452 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 240 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 113, 80 |
| Conread position: | 35-371 |
| Cow position: | chr8:38464647-38464983 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 237 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 71, 148 |
| Conread position: | 35-371 |
| Cow position: | chr8:42607640-42607305 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 115, 158 |
| Conread position: | 35-381 |
| Cow position: | chr8:23179906-23179558 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 94 |
| Conread position: | 35-383 |
| Cow position: | chr8:6233261-6232912 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 206 |
| Conread position: | 35-386 |
| Cow position: | chr8:33431894-33432242 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 245 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 117, 18 |
| Conread position: | 40-307 |
| Cow position: | chr8:9230239-9229989 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 40-327 |
| Cow position: | chr8:24234774-24235058 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 207 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 218, 125 |
| Conread position: | 40-333 |
| Cow position: | chr8:33400551-33400264 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 146 |
| Conread position: | 40-361 |
| Cow position: | chr8:53363203-53362889 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 148, 101 |
| Conread position: | 40-364 |
| Cow position: | chr8:24497894-24498216 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 140 |
| Conread position: | 40-364 |
| Cow position: | chr8:36398273-36397949 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 66 |
| Conread position: | 42-368 |
| Cow position: | chr8:46235345-46235672 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 103 |
| Conread position: | 43-295 |
| Cow position: | chr8:29262432-29262681 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 133, 57 |
| Conread position: | 55-337 |
| Cow position: | chr8:4563779-4563486 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 22, 202 |
| Conread position: | 79-371 |
| Cow position: | chr8:58519983-58520266 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 71, 11 |
| Conread position: | 80-311 |
| Cow position: | chr8:22183253-22183486 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 170 |
| Conread position: | 80-355 |
| Cow position: | chr8:38254699-38254980 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 101, 114 |
| Conread position: | 80-371 |
| Cow position: | chr8:38572595-38572297 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 108, 54 |
| Conread position: | 81-367 |
| Cow position: | chr8:50898417-50898704 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 112, 166 |
| Conread position: | 84-371 |
| Cow position: | chr8:25455092-25455381 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 104, 96 |
| Conread position: | 84-381 |
| Cow position: | chr8:10176463-10176162 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 59, 171 |
| Conread position: | 97-380 |
| Cow position: | chr8:554487-554203 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 207 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 90, 145 |
| Conread position: | 99-300 |
| Cow position: | chr8:20311622-20311823 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 92, 150 |
| Conread position: | 100-382 |
| Cow position: | chr8:36375811-36375530 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 21, 110 |
| Conread position: | 105-329 |
| Cow position: | chr8:3887066-3887292 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 75, 145 |
| Conread position: | 105-367 |
| Cow position: | chr8:35966325-35966059 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 83, 46 |
| Conread position: | 105-368 |
| Cow position: | chr8:10970534-10970801 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 84, 144 |
| Conread position: | 107-342 |
| Cow position: | chr8:53251976-53251745 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 81, 54 |
| Conread position: | 110-304 |
| Cow position: | chr8:47169667-47169860 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 78, 69 |
| Conread position: | 125-383 |
| Cow position: | chr8:2814347-2814609 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 64, 69 |
| Conread position: | 126-387 |
| Cow position: | chr8:17103689-17103432 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 62, 26 |
| Conread position: | 132-359 |
| Cow position: | chr8:27648377-27648606 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 125 |
| Conread position: | 132-368 |
| Cow position: | chr8:6816938-6816698 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 56, 41 |
| Conread position: | 133-305 |
| Cow position: | chr8:61157487-61157318 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 124, 46 |
| Conread position: | 135-387 |
| Cow position: | chr8:31775920-31776180 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 53, 114 |
| Conread position: | 136-340 |
| Cow position: | chr8:844198-844002 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 29 |
| Conread position: | 142-377 |
| Cow position: | chr8:47136267-47136031 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 45, 67 |
| Conread position: | 142-390 |
| Cow position: | chr8:55925942-55926191 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 46, 107 |
| Conread position: | 148-383 |
| Cow position: | chr8:24867996-24867757 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 40, 101 |
| Conread position: | 149-361 |
| Cow position: | chr8:47328094-47328310 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 100 |
| Conread position: | 149-386 |
| Cow position: | chr8:34477865-34478109 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 34, 104 |
| Conread position: | 150-381 |
| Cow position: | chr8:57045747-57045514 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 107 |
| Conread position: | 151-381 |
| Cow position: | chr8:3338842-3339071 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 156, 34 |
| Conread position: | 154-382 |
| Cow position: | chr8:28185901-28185671 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 34, 102 |
| Conread position: | 170-381 |
| Cow position: | chr8:35990818-35991034 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 82 |
| Conread position: | 187-371 |
| Cow position: | chr8:37147909-37148095 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 108, 61 |
| Conread position: | 187-371 |
| Cow position: | chr8:39555767-39555954 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 68, 61 |
Show alignments to all cow chromosomes.