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Cow genome map

           
Conread name:
           
rcte07_n20.y1
        

               
Conread position:
               
1-259
               

               
Cow position:
               
chr11:30912178-30911933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr11:36986771-36987041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr11:50778180-50778464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr11:38638930-38639208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr11:23232704-23232405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr11:377839-377523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr11:23138256-23137933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr11:20761659-20761965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr11:67600591-67600893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
31, 8
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr11:29947120-29946803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
4-282
               

               
Cow position:
               
chr11:23128732-23128445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 33
               

               
Conread position:
               
5-318
               

               
Cow position:
               
chr11:4653165-4652845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
6-277
               

               
Cow position:
               
chr11:44036534-44036808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
6-300
               

               
Cow position:
               
chr11:11557979-11558283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
6-305
               

               
Cow position:
               
chr11:67747103-67747394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
100, 6
               

               
Conread position:
               
6-306
               

               
Cow position:
               
chr11:76114466-76114760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
6-311
               

               
Cow position:
               
chr11:17831406-17831100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
6, 130
               

               
Conread position:
               
7-322
               

               
Cow position:
               
chr11:65157593-65157277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
70, 18
               

               
Conread position:
               
7-322
               

               
Cow position:
               
chr11:77750957-77750633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
8-251
               

               
Cow position:
               
chr11:24937481-24937728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
97, 5
               

               
Conread position:
               
9-257
               

               
Cow position:
               
chr11:67550555-67550309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
9-301
               

               
Cow position:
               
chr11:78381237-78380952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
9-311
               

               
Cow position:
               
chr11:73512614-73512319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr11:63469697-63469976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
96, 33
               

               
Conread position:
               
10-311
               

               
Cow position:
               
chr11:43430635-43430333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 13
               

               
Conread position:
               
10-311
               

               
Cow position:
               
chr11:77128478-77128787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
97, 13
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr11:84385820-84385511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
48, 194
               

               
Conread position:
               
10-322
               

               
Cow position:
               
chr11:65762782-65762456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 141
               

               
Conread position:
               
11-272
               

               
Cow position:
               
chr11:56654368-56654639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
11-282
               

               
Cow position:
               
chr11:18572623-18572894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
11-291
               

               
Cow position:
               
chr11:73354232-73353956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
11-297
               

               
Cow position:
               
chr11:21728450-21728173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
182, 96
               

               
Conread position:
               
11-298
               

               
Cow position:
               
chr11:59872750-59873039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
11-304
               

               
Cow position:
               
chr11:8988409-8988116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
95, 53
               

               
Conread position:
               
11-306
               

               
Cow position:
               
chr11:63847669-63847964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
97, 12
               

               
Conread position:
               
11-316
               

               
Cow position:
               
chr11:30354888-30355187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
119, 54
               

               
Conread position:
               
12-301
               

               
Cow position:
               
chr11:83043540-83043250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
97, 13
               

               
Conread position:
               
12-322
               

               
Cow position:
               
chr11:47772571-47772254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
13-311
               

               
Cow position:
               
chr11:62225805-62226118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
19, 5
               

               
Conread position:
               
13-312
               

               
Cow position:
               
chr11:61958926-61958621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
56, 126
               

               
Conread position:
               
13-322
               

               
Cow position:
               
chr11:36286518-36286836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
15-281
               

               
Cow position:
               
chr11:8840915-8840652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
227, 112
               

               
Conread position:
               
17-287
               

               
Cow position:
               
chr11:42358944-42359218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
78, 45
               

               
Conread position:
               
17-312
               

               
Cow position:
               
chr11:56518485-56518187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 134
               

               
Conread position:
               
18-289
               

               
Cow position:
               
chr11:53553062-53553317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
263, 89
               

               
Conread position:
               
19-298
               

               
Cow position:
               
chr11:38577946-38577669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
19-300
               

               
Cow position:
               
chr11:20238499-20238788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
19-314
               

               
Cow position:
               
chr11:34113092-34113390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
70, 41
               

               
Conread position:
               
19-315
               

               
Cow position:
               
chr11:46746456-46746767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
21-322
               

               
Cow position:
               
chr11:53778441-53778748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
11, 130
               

               
Conread position:
               
24-302
               

               
Cow position:
               
chr11:64048250-64048516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
26-277
               

               
Cow position:
               
chr11:55494513-55494768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 117
               

               
Conread position:
               
26-311
               

               
Cow position:
               
chr11:50072784-50073056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
26-320
               

               
Cow position:
               
chr11:34121034-34121324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
82, 241
               

               
Conread position:
               
27-240
               

               
Cow position:
               
chr11:62490268-62490490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
81, 42
               

               
Conread position:
               
27-270
               

               
Cow position:
               
chr11:13040326-13040090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
5, 43
               

               
Conread position:
               
27-281
               

               
Cow position:
               
chr11:47544965-47545223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
81, 185
               

               
Conread position:
               
27-287
               

               
Cow position:
               
chr11:36799468-36799209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
27-316
               

               
Cow position:
               
chr11:83066329-83066614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
76, 126
               

               
Conread position:
               
27-320
               

               
Cow position:
               
chr11:38236078-38236379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
78, 115
               

               
Conread position:
               
27-322
               

               
Cow position:
               
chr11:30708333-30708633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 130
               

               
Conread position:
               
27-322
               

               
Cow position:
               
chr11:61454697-61454374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 194
               

               
Conread position:
               
29-254
               

               
Cow position:
               
chr11:5075386-5075162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
33, 107
               

               
Conread position:
               
29-276
               

               
Cow position:
               
chr11:16233099-16232847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
82, 120
               

               
Conread position:
               
29-287
               

               
Cow position:
               
chr11:8148060-8147800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
76, 49
               

               
Conread position:
               
29-287
               

               
Cow position:
               
chr11:58588184-58588443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
74, 127
               

               
Conread position:
               
29-300
               

               
Cow position:
               
chr11:17278829-17278564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 106
               

               
Conread position:
               
29-306
               

               
Cow position:
               
chr11:35684658-35684384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
101, 79
               

               
Conread position:
               
29-314
               

               
Cow position:
               
chr11:22978028-22977749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 110
               

               
Conread position:
               
29-318
               

               
Cow position:
               
chr11:58990346-58990619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
29-322
               

               
Cow position:
               
chr11:46748027-46747731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
40, 31
               

               
Conread position:
               
29-322
               

               
Cow position:
               
chr11:48474539-48474839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
36, 121
               

               
Conread position:
               
29-322
               

               
Cow position:
               
chr11:62620220-62620504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 86
               

               
Conread position:
               
29-322
               

               
Cow position:
               
chr11:66188484-66188191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
81, 53
               

               
Conread position:
               
30-277
               

               
Cow position:
               
chr11:17660932-17661172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
73, 108
               

               
Conread position:
               
30-302
               

               
Cow position:
               
chr11:26535616-26535900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
31-270
               

               
Cow position:
               
chr11:52983514-52983757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 119
               

               
Conread position:
               
31-314
               

               
Cow position:
               
chr11:45434925-45435205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 99
               

               
Conread position:
               
32-221
               

               
Cow position:
               
chr11:75355450-75355653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
32-224
               

               
Cow position:
               
chr11:18591592-18591398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
32-225
               

               
Cow position:
               
chr11:8339566-8339369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 120
               

               
Conread position:
               
32-226
               

               
Cow position:
               
chr11:42793133-42792935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
73, 107
               

               
Conread position:
               
32-257
               

               
Cow position:
               
chr11:10620483-10620259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 18
               

               
Conread position:
               
32-272
               

               
Cow position:
               
chr11:5307-5547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
32-272
               

               
Cow position:
               
chr11:70619892-70620128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 51
               

               
Conread position:
               
32-274
               

               
Cow position:
               
chr11:64090244-64090011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
121, 76
               

               
Conread position:
               
32-276
               

               
Cow position:
               
chr11:61427446-61427680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 96
               

               
Conread position:
               
32-276
               

               
Cow position:
               
chr11:69810746-69810991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
92, 114
               

               
Conread position:
               
32-277
               

               
Cow position:
               
chr11:35874152-35873914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
103, 76
               

               
Conread position:
               
32-277
               

               
Cow position:
               
chr11:47899119-47899357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
32-277
               

               
Cow position:
               
chr11:64044081-64044322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
92, 76
               

               
Conread position:
               
32-281
               

               
Cow position:
               
chr11:31352730-31352459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
32-284
               

               
Cow position:
               
chr11:11232615-11232361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
76, 98
               

               
Conread position:
               
32-289
               

               
Cow position:
               
chr11:16843163-16842886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 37
               

               
Conread position:
               
32-293
               

               
Cow position:
               
chr11:9270888-9270622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 125
               

               
Conread position:
               
32-293
               

               
Cow position:
               
chr11:19500940-19500687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
75, 96
               

               
Conread position:
               
32-294
               

               
Cow position:
               
chr11:41023-41285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 57
               

               
Conread position:
               
32-294
               

               
Cow position:
               
chr11:27746764-27747030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
72, 106
               

               
Conread position:
               
32-294
               

               
Cow position:
               
chr11:42296778-42296514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
32-295
               

               
Cow position:
               
chr11:44636918-44636648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 109
               

               
Conread position:
               
32-295
               

               
Cow position:
               
chr11:62155464-62155745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 212
               

               
Conread position:
               
32-296
               

               
Cow position:
               
chr11:20602067-20602334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 115
               

               
Conread position:
               
32-296
               

               
Cow position:
               
chr11:55761719-55761973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 44
               

               
Conread position:
               
32-297
               

               
Cow position:
               
chr11:50152976-50152704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 112
               

               
Conread position:
               
32-298
               

               
Cow position:
               
chr11:19247356-19247088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
32-298
               

               
Cow position:
               
chr11:40479015-40478743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
23, 123
               

               
Conread position:
               
32-298
               

               
Cow position:
               
chr11:63482587-63482321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 112
               

               
Conread position:
               
32-299
               

               
Cow position:
               
chr11:45898213-45897940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 153
               

               
Conread position:
               
32-300
               

               
Cow position:
               
chr11:2907679-2907417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
76, 111
               

               
Conread position:
               
32-300
               

               
Cow position:
               
chr11:30639106-30638838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
32-300
               

               
Cow position:
               
chr11:62239586-62239856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 108
               

               
Conread position:
               
32-300
               

               
Cow position:
               
chr11:80923484-80923211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
73, 113
               

               
Conread position:
               
32-301
               

               
Cow position:
               
chr11:3393369-3393097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 13
               

               
Conread position:
               
32-301
               

               
Cow position:
               
chr11:15632717-15632455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
67, 116
               

               
Conread position:
               
32-301
               

               
Cow position:
               
chr11:30830776-30830501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 119
               

               
Conread position:
               
32-301
               

               
Cow position:
               
chr11:40818800-40818515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
33, 124
               

               
Conread position:
               
32-301
               

               
Cow position:
               
chr11:70086164-70086445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
26, 213
               

               
Conread position:
               
32-301
               

               
Cow position:
               
chr11:83230551-83230288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
63, 97
               

               
Conread position:
               
32-302
               

               
Cow position:
               
chr11:11469795-11469537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
32-302
               

               
Cow position:
               
chr11:15338914-15339176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
32-302
               

               
Cow position:
               
chr11:16907203-16906937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
169, 32
               

               
Conread position:
               
32-302
               

               
Cow position:
               
chr11:27248332-27248604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
72, 116
               

               
Conread position:
               
32-302
               

               
Cow position:
               
chr11:48295872-48296144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 116
               

               
Conread position:
               
32-302
               

               
Cow position:
               
chr11:52381034-52380756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
74, 109
               

               
Conread position:
               
32-302
               

               
Cow position:
               
chr11:77319252-77319528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
72, 109
               

               
Conread position:
               
32-303
               

               
Cow position:
               
chr11:23586477-23586753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
76, 117
               

               
Conread position:
               
32-306
               

               
Cow position:
               
chr11:2083976-2084261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 123
               

               
Conread position:
               
32-306
               

               
Cow position:
               
chr11:41176110-41175827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 118
               

               
Conread position:
               
32-306
               

               
Cow position:
               
chr11:44642447-44642172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
76, 112
               

               
Conread position:
               
32-308
               

               
Cow position:
               
chr11:44234193-44234473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
32-310
               

               
Cow position:
               
chr11:11125502-11125784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
72, 117
               

               
Conread position:
               
32-311
               

               
Cow position:
               
chr11:952111-952390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
71, 45
               

               
Conread position:
               
32-311
               

               
Cow position:
               
chr11:1849322-1849048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
247, 69
               

               
Conread position:
               
32-311
               

               
Cow position:
               
chr11:3282891-3283148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
95, 52
               

               
Conread position:
               
32-311
               

               
Cow position:
               
chr11:30954838-30955121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 110
               

               
Conread position:
               
32-311
               

               
Cow position:
               
chr11:33310809-33311100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 124
               

               
Conread position:
               
32-311
               

               
Cow position:
               
chr11:42044148-42043872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
81, 48
               

               
Conread position:
               
32-311
               

               
Cow position:
               
chr11:48272037-48272323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 109
               

               
Conread position:
               
32-311
               

               
Cow position:
               
chr11:59702326-59702616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 107
               

               
Conread position:
               
32-311
               

               
Cow position:
               
chr11:73924720-73924438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
71, 47
               

               
Conread position:
               
32-312
               

               
Cow position:
               
chr11:27764995-27765275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
15, 112
               

               
Conread position:
               
32-314
               

               
Cow position:
               
chr11:13043306-13043020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
26, 112
               

               
Conread position:
               
32-314
               

               
Cow position:
               
chr11:33348346-33348066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 105
               

               
Conread position:
               
32-314
               

               
Cow position:
               
chr11:48544276-48544564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 106
               

               
Conread position:
               
32-314
               

               
Cow position:
               
chr11:65607851-65607565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 117
               

               
Conread position:
               
32-314
               

               
Cow position:
               
chr11:74316552-74316834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
73, 109
               

               
Conread position:
               
32-316
               

               
Cow position:
               
chr11:75874912-75874629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
76, 108
               

               
Conread position:
               
32-320
               

               
Cow position:
               
chr11:27405226-27404945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
75, 101
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr11:1380521-1380805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 55
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr11:1625378-1625094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
66, 88
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr11:4207152-4207444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
73, 106
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr11:7590033-7590319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
76, 117
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr11:15016881-15017186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 266
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr11:18509179-18508901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 78
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr11:26144259-26143966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 119
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr11:30192012-30192309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
50, 108
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr11:32436171-32436466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
26, 117
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr11:33287113-33286827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 104
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr11:34145074-34144791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
76, 32
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr11:35153985-35153693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
76, 109
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr11:35580097-35580389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
68, 118
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr11:45646755-45646465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
76, 107
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr11:55333751-55334047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
101, 76
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr11:72375846-72375538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
68, 122
               

               
Conread position:
               
32-322
               

               
Cow position:
               
chr11:79728830-79728537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
33, 117
               

               
Conread position:
               
33-220
               

               
Cow position:
               
chr11:6154255-6154440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
66, 10
               

               
Conread position:
               
33-227
               

               
Cow position:
               
chr11:955206-955407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 115
               

               
Conread position:
               
33-274
               

               
Cow position:
               
chr11:82940781-82940539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 123
               

               
Conread position:
               
33-282
               

               
Cow position:
               
chr11:22499508-22499273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
33-288
               

               
Cow position:
               
chr11:10213721-10213468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
56, 10
               

               
Conread position:
               
33-292
               

               
Cow position:
               
chr11:45631921-45631662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
76, 113
               

               
Conread position:
               
33-293
               

               
Cow position:
               
chr11:2576063-2575799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
75, 109
               

               
Conread position:
               
33-297
               

               
Cow position:
               
chr11:24601814-24602077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
208, 75
               

               
Conread position:
               
33-297
               

               
Cow position:
               
chr11:71390723-71390457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
75, 115
               

               
Conread position:
               
33-301
               

               
Cow position:
               
chr11:3175531-3175786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
33-302
               

               
Cow position:
               
chr11:38874563-38874292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 118
               

               
Conread position:
               
33-306
               

               
Cow position:
               
chr11:11646910-11647203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
70, 102
               

               
Conread position:
               
33-306
               

               
Cow position:
               
chr11:33341305-33341026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
33-307
               

               
Cow position:
               
chr11:80530206-80530477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
26, 112
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr11:32693631-32693365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 108
               

               
Conread position:
               
33-309
               

               
Cow position:
               
chr11:70609626-70609917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
25, 119
               

               
Conread position:
               
33-310
               

               
Cow position:
               
chr11:2092180-2092457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
65, 106
               

               
Conread position:
               
33-311
               

               
Cow position:
               
chr11:36238624-36238901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
75, 110
               

               
Conread position:
               
33-311
               

               
Cow position:
               
chr11:48649820-48650093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 97
               

               
Conread position:
               
33-314
               

               
Cow position:
               
chr11:259332-259048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
73, 107
               

               
Conread position:
               
33-314
               

               
Cow position:
               
chr11:21844292-21844011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
70, 111
               

               
Conread position:
               
33-314
               

               
Cow position:
               
chr11:41271982-41272265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 117
               

               
Conread position:
               
33-314
               

               
Cow position:
               
chr11:52297380-52297095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
71, 108
               

               
Conread position:
               
33-314
               

               
Cow position:
               
chr11:55052727-55052995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
33-320
               

               
Cow position:
               
chr11:63909817-63909529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 107
               

               
Conread position:
               
33-322
               

               
Cow position:
               
chr11:34646432-34646723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 57
               

               
Conread position:
               
33-322
               

               
Cow position:
               
chr11:67804592-67804873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 112
               

               
Conread position:
               
34-265
               

               
Cow position:
               
chr11:82796444-82796212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
116, 92
               

               
Conread position:
               
34-277
               

               
Cow position:
               
chr11:13061388-13061146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
74, 109
               

               
Conread position:
               
34-282
               

               
Cow position:
               
chr11:43360946-43360690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
27, 169
               

               
Conread position:
               
34-287
               

               
Cow position:
               
chr11:30924991-30925253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 76
               

               
Conread position:
               
34-295
               

               
Cow position:
               
chr11:29960147-29960402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
245, 34
               

               
Conread position:
               
34-296
               

               
Cow position:
               
chr11:4663204-4662940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
76, 115
               

               
Conread position:
               
34-296
               

               
Cow position:
               
chr11:17083456-17083203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
34-301
               

               
Cow position:
               
chr11:69119144-69119407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 55
               

               
Conread position:
               
34-305
               

               
Cow position:
               
chr11:8525269-8524997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
74, 115
               

               
Conread position:
               
34-307
               

               
Cow position:
               
chr11:1071250-1070972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
34-308
               

               
Cow position:
               
chr11:26845740-26845475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
34-314
               

               
Cow position:
               
chr11:68206997-68206718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 99
               

               
Conread position:
               
34-316
               

               
Cow position:
               
chr11:34962902-34963201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
14, 189
               

               
Conread position:
               
34-322
               

               
Cow position:
               
chr11:36112263-36112546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
23, 103
               

               
Conread position:
               
34-322
               

               
Cow position:
               
chr11:77745414-77745121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
35-207
               

               
Cow position:
               
chr11:16251404-16251225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
73, 106
               

               
Conread position:
               
35-276
               

               
Cow position:
               
chr11:39115336-39115583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 100
               

               
Conread position:
               
35-276
               

               
Cow position:
               
chr11:49934893-49934643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 8
               

               
Conread position:
               
35-276
               

               
Cow position:
               
chr11:63434213-63433972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 217
               

               
Conread position:
               
35-276
               

               
Cow position:
               
chr11:81162590-81162345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
65, 44
               

               
Conread position:
               
35-277
               

               
Cow position:
               
chr11:80820156-80819916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
35-282
               

               
Cow position:
               
chr11:76606526-76606766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
35-294
               

               
Cow position:
               
chr11:43897983-43898244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
35-296
               

               
Cow position:
               
chr11:51729131-51729394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
43, 113
               

               
Conread position:
               
35-297
               

               
Cow position:
               
chr11:17227803-17227536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
72, 183
               

               
Conread position:
               
35-298
               

               
Cow position:
               
chr11:39499201-39499467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 54
               

               
Conread position:
               
35-298
               

               
Cow position:
               
chr11:62151042-62150784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 44
               

               
Conread position:
               
35-301
               

               
Cow position:
               
chr11:48496744-48496480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
35-313
               

               
Cow position:
               
chr11:36182529-36182819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
71, 106
               

               
Conread position:
               
35-322
               

               
Cow position:
               
chr11:17493321-17493612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
72, 105
               

               
Conread position:
               
35-322
               

               
Cow position:
               
chr11:46580198-46580485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 116
               

               
Conread position:
               
36-284
               

               
Cow position:
               
chr11:44222734-44222982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
77, 59
               

               
Conread position:
               
36-294
               

               
Cow position:
               
chr11:2917742-2917481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 105
               

               
Conread position:
               
36-294
               

               
Cow position:
               
chr11:49152795-49153054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 54
               

               
Conread position:
               
36-297
               

               
Cow position:
               
chr11:2925444-2925192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
72, 63
               

               
Conread position:
               
36-305
               

               
Cow position:
               
chr11:25386907-25387186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
64, 112
               

               
Conread position:
               
36-314
               

               
Cow position:
               
chr11:14470213-14470489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
36-322
               

               
Cow position:
               
chr11:13592580-13592867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
29, 98
               

               
Conread position:
               
37-312
               

               
Cow position:
               
chr11:63917622-63917353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 103
               

               
Conread position:
               
37-314
               

               
Cow position:
               
chr11:35213316-35213041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
37-322
               

               
Cow position:
               
chr11:5201805-5201517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
51, 109
               

               
Conread position:
               
37-322
               

               
Cow position:
               
chr11:56187464-56187735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 93
               

               
Conread position:
               
37-322
               

               
Cow position:
               
chr11:63435362-63435650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
71, 177
               

               
Conread position:
               
40-297
               

               
Cow position:
               
chr11:62663373-62663126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
42-277
               

               
Cow position:
               
chr11:18851768-18851996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
42-301
               

               
Cow position:
               
chr11:70250775-70251031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
53, 100
               

               
Conread position:
               
42-306
               

               
Cow position:
               
chr11:44031852-44032131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 107
               

               
Conread position:
               
42-311
               

               
Cow position:
               
chr11:40573484-40573213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
6, 103
               

               
Conread position:
               
43-282
               

               
Cow position:
               
chr11:86720561-86720324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
65, 47
               

               
Conread position:
               
43-310
               

               
Cow position:
               
chr11:6633562-6633832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
43-310
               

               
Cow position:
               
chr11:28643935-28644209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 110
               

               
Conread position:
               
46-297
               

               
Cow position:
               
chr11:33825037-33824797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
62, 92
               

               
Conread position:
               
46-301
               

               
Cow position:
               
chr11:23407315-23407577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 93
               

               
Conread position:
               
48-311
               

               
Cow position:
               
chr11:69075764-69076032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
51-276
               

               
Cow position:
               
chr11:65767056-65767287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
57, 90
               

               
Conread position:
               
53-299
               

               
Cow position:
               
chr11:21497382-21497633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
53-301
               

               
Cow position:
               
chr11:67615382-67615132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
32, 72
               

               
Conread position:
               
53-313
               

               
Cow position:
               
chr11:69977838-69978095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 84
               

               
Conread position:
               
56-308
               

               
Cow position:
               
chr11:261399-261148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
52, 87
               

               
Conread position:
               
57-276
               

               
Cow position:
               
chr11:80537351-80537574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
48, 32
               

               
Conread position:
               
57-301
               

               
Cow position:
               
chr11:39462494-39462736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 50
               

               
Conread position:
               
57-302
               

               
Cow position:
               
chr11:62788993-62789243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
50, 80
               

               
Conread position:
               
64-314
               

               
Cow position:
               
chr11:67615057-67614797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
44, 225
               

               
Conread position:
               
66-305
               

               
Cow position:
               
chr11:41293945-41293701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
67-306
               

               
Cow position:
               
chr11:40608722-40608476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
33, 78
               

               
Conread position:
               
71-322
               

               
Cow position:
               
chr11:32398525-32398769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
82-287
               

               
Cow position:
               
chr11:24599494-24599290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
84-302
               

               
Cow position:
               
chr11:31227860-31228074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
24, 60
               

               
Conread position:
               
85-318
               

               
Cow position:
               
chr11:64351894-64351660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 57
               

               
Conread position:
               
86-305
               

               
Cow position:
               
chr11:42066754-42066981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 62
               

               
Conread position:
               
89-296
               

               
Cow position:
               
chr11:32691067-32690863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
70, 46
               

               
Conread position:
               
90-308
               

               
Cow position:
               
chr11:27565239-27565450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
19, 47
               

               
Conread position:
               
93-306
               

               
Cow position:
               
chr11:49872978-49872771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
93-322
               

               
Cow position:
               
chr11:8669916-8670145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
108, 33
               

               
Conread position:
               
94-276
               

               
Cow position:
               
chr11:83032591-83032768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
94-277
               

               
Cow position:
               
chr11:249575-249393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
94-282
               

               
Cow position:
               
chr11:6194115-6194300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
175, 28
               

               
Conread position:
               
94-284
               

               
Cow position:
               
chr11:8428420-8428607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
94-292
               

               
Cow position:
               
chr11:41603780-41603583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
94-301
               

               
Cow position:
               
chr11:70978821-70978621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
187, 43
               

               
Conread position:
               
94-302
               

               
Cow position:
               
chr11:17676461-17676259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
94-302
               

               
Cow position:
               
chr11:30493908-30494107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
94-302
               

               
Cow position:
               
chr11:52690612-52690408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
94-302
               

               
Cow position:
               
chr11:81168122-81167915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
31, 111
               

               
Conread position:
               
94-303
               

               
Cow position:
               
chr11:35803043-35803251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
141, 39
               

               
Conread position:
               
94-304
               

               
Cow position:
               
chr11:14466579-14466372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
194, 48
               

               
Conread position:
               
94-306
               

               
Cow position:
               
chr11:375364-375577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
24, 45
               

               
Conread position:
               
94-308
               

               
Cow position:
               
chr11:64406135-64406351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
143, 39
               

               
Conread position:
               
94-308
               

               
Cow position:
               
chr11:72292450-72292670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 144
               

               
Conread position:
               
94-314
               

               
Cow position:
               
chr11:35536497-35536712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
94-314
               

               
Cow position:
               
chr11:70756391-70756602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
94-320
               

               
Cow position:
               
chr11:19592081-19591867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
94-322
               

               
Cow position:
               
chr11:63999180-63998962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
94-322
               

               
Cow position:
               
chr11:80413102-80412881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
94-322
               

               
Cow position:
               
chr11:80564202-80564425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
199, 47
               

               
Conread position:
               
96-322
               

               
Cow position:
               
chr11:35926995-35926780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
100-306
               

               
Cow position:
               
chr11:17721889-17721685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
101-253
               

               
Cow position:
               
chr11:54218633-54218779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
101-302
               

               
Cow position:
               
chr11:46922982-46922771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
101-302
               

               
Cow position:
               
chr11:62813035-62812836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
101-305
               

               
Cow position:
               
chr11:18910962-18910767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
101-314
               

               
Cow position:
               
chr11:67312687-67312908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
51, 114
               

               
Conread position:
               
102-306
               

               
Cow position:
               
chr11:18587690-18587478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
103-311
               

               
Cow position:
               
chr11:70825869-70826071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
104-256
               

               
Cow position:
               
chr11:36914801-36914659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
104-268
               

               
Cow position:
               
chr11:82740427-82740589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
104-271
               

               
Cow position:
               
chr11:84490570-84490416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
165, 22
               

               
Conread position:
               
104-277
               

               
Cow position:
               
chr11:16342311-16342140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
127, 29
               

               
Conread position:
               
104-277
               

               
Cow position:
               
chr11:28168505-28168334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
104-283
               

               
Cow position:
               
chr11:53279795-53279619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
166, 33
               

               
Conread position:
               
104-287
               

               
Cow position:
               
chr11:19586374-19586558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 37
               

               
Conread position:
               
104-300
               

               
Cow position:
               
chr11:39060680-39060491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
104-302
               

               
Cow position:
               
chr11:17036610-17036416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
104-305
               

               
Cow position:
               
chr11:48085835-48086035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
112, 26
               

               
Conread position:
               
104-308
               

               
Cow position:
               
chr11:79019140-79018939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
104-314
               

               
Cow position:
               
chr11:33409341-33409135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
184, 29
               

               
Conread position:
               
104-322
               

               
Cow position:
               
chr11:8437770-8437559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
130, 29
               

               
Conread position:
               
105-259
               

               
Cow position:
               
chr11:69392482-69392633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
105-302
               

               
Cow position:
               
chr11:31410963-31410764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
105-314
               

               
Cow position:
               
chr11:42160140-42159932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
106-278
               

               
Cow position:
               
chr11:69652863-69652692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
23, 40
               

               
Conread position:
               
106-294
               

               
Cow position:
               
chr11:84890799-84890612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 38
               

               
Conread position:
               
106-306
               

               
Cow position:
               
chr11:41313735-41313537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
108-297
               

               
Cow position:
               
chr11:30867104-30867292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
108-314
               

               
Cow position:
               
chr11:4637250-4637047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
110-295
               

               
Cow position:
               
chr11:64104922-64105104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
110-311
               

               
Cow position:
               
chr11:83033311-83033117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
113-278
               

               
Cow position:
               
chr11:30483845-30484009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
114-281
               

               
Cow position:
               
chr11:3790764-3790935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
115-311
               

               
Cow position:
               
chr11:10363458-10363260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
118-311
               

               
Cow position:
               
chr11:29699768-29699576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
86, 15
               

               
Conread position:
               
121-302
               

               
Cow position:
               
chr11:25119997-25119818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
167, 12
               

               
Conread position:
               
122-322
               

               
Cow position:
               
chr11:1932556-1932360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
124-311
               

               
Cow position:
               
chr11:22747390-22747207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
125-320
               

               
Cow position:
               
chr11:11533990-11533802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
129-321
               

               
Cow position:
               
chr11:48248275-48248081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
102, 109
               

               
Conread position:
               
132-297
               

               
Cow position:
               
chr11:18447549-18447384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 150
               

               
Conread position:
               
132-302
               

               
Cow position:
               
chr11:11523524-11523341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 92
               

               
Conread position:
               
133-285
               

               
Cow position:
               
chr11:36329090-36328938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
133-301
               

               
Cow position:
               
chr11:72884649-72884484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
134-297
               

               
Cow position:
               
chr11:80639604-80639438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
134-321
               

               
Cow position:
               
chr11:20205906-20205718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
135-314
               

               
Cow position:
               
chr11:37425194-37425026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
135-322
               

               
Cow position:
               
chr11:62889946-62889764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
136-306
               

               
Cow position:
               
chr11:54334275-54334446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
138-302
               

               
Cow position:
               
chr11:38211595-38211757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
138-311
               

               
Cow position:
               
chr11:19606527-19606701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
138-311
               

               
Cow position:
               
chr11:56290462-56290634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
141-275
               

               
Cow position:
               
chr11:18914978-18915113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
142-277
               

               
Cow position:
               
chr11:16801998-16801868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
142-296
               

               
Cow position:
               
chr11:34413386-34413232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
142-302
               

               
Cow position:
               
chr11:34692807-34692967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
142-310
               

               
Cow position:
               
chr11:4225051-4225212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
96, 65
               

               
Conread position:
               
142-312
               

               
Cow position:
               
chr11:17321601-17321780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
104, 83
               

               
Conread position:
               
143-295
               

               
Cow position:
               
chr11:25668962-25669111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
143-297
               

               
Cow position:
               
chr11:82731043-82730889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
52, 60
               

               
Conread position:
               
143-320
               

               
Cow position:
               
chr11:35109583-35109411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
78, 53
               

               
Conread position:
               
143-322
               

               
Cow position:
               
chr11:29786543-29786365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
136, 11
               

               
Conread position:
               
144-316
               

               
Cow position:
               
chr11:65826795-65826621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
145-289
               

               
Cow position:
               
chr11:46952904-46953048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
145-301
               

               
Cow position:
               
chr11:897630-897785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
145-302
               

               
Cow position:
               
chr11:63866702-63866545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
112, 38
               

               
Conread position:
               
145-305
               

               
Cow position:
               
chr11:30964303-30964460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
113, 21
               

               
Conread position:
               
145-322
               

               
Cow position:
               
chr11:15382546-15382367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
146-277
               

               
Cow position:
               
chr11:76822128-76822000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
147-291
               

               
Cow position:
               
chr11:4430174-4430034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
147-322
               

               
Cow position:
               
chr11:21885792-21885961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
152-285
               

               
Cow position:
               
chr11:3248745-3248610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 63
               

               
Conread position:
               
154-300
               

               
Cow position:
               
chr11:58938779-58938633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
154-302
               

               
Cow position:
               
chr11:53717841-53717692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
154-311
               

               
Cow position:
               
chr11:58173591-58173747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
155-320
               

               
Cow position:
               
chr11:3896732-3896572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
155-322
               

               
Cow position:
               
chr11:46427441-46427276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
120, 135
               

               
Conread position:
               
156-302
               

               
Cow position:
               
chr11:30895036-30894887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
156-305
               

               
Cow position:
               
chr11:65803903-65803753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
157-298
               

               
Cow position:
               
chr11:49255373-49255508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
158-310
               

               
Cow position:
               
chr11:71021970-71022124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
163-322
               

               
Cow position:
               
chr11:17638560-17638396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
166-301
               

               
Cow position:
               
chr11:22027411-22027277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
81, 43
               

               
Conread position:
               
166-301
               

               
Cow position:
               
chr11:63165669-63165532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
166-313
               

               
Cow position:
               
chr11:35669974-35669830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
167-322
               

               
Cow position:
               
chr11:2900742-2900585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
168-298
               

               
Cow position:
               
chr11:56114918-56115050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
170-297
               

               
Cow position:
               
chr11:905401-905276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
173-311
               

               
Cow position:
               
chr11:17195846-17195707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
101, 85
               

               
Conread position:
               
173-314
               

               
Cow position:
               
chr11:48315412-48315271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
175-315
               

               
Cow position:
               
chr11:30986628-30986765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
175-322
               

               
Cow position:
               
chr11:70741129-70741276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
98, 110
               

               
Conread position:
               
179-292
               

               
Cow position:
               
chr11:34238580-34238469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
180-297
               

               
Cow position:
               
chr11:22884405-22884521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
182-287
               

               
Cow position:
               
chr11:25320179-25320284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
185-322
               

               
Cow position:
               
chr11:2484798-2484667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
188-322
               

               
Cow position:
               
chr11:80008068-80007934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
196-310
               

               
Cow position:
               
chr11:31326013-31326128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
199-322
               

               
Cow position:
               
chr11:36104323-36104443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
36, 101
               

               
Conread position:
               
201-316
               

               
Cow position:
               
chr11:23278952-23278837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
202-322
               

               
Cow position:
               
chr11:11483324-11483449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
203-305
               

               
Cow position:
               
chr11:5200564-5200462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.