Non-Coding RNA Search

Cow genome map


           Conread name:
           rcte07_n20.y1
        

               Conread position:
               1-314
               

               Cow position:
               chr21:38449560-38449244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               31, 22
               

               Conread position:
               1-314
               

               Cow position:
               chr21:47465230-47464911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               85, 22
               

               Conread position:
               1-322
               

               Cow position:
               chr21:22718893-22718573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               23, 147
               

               Conread position:
               2-278
               

               Cow position:
               chr21:30607190-30606914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               11, 53
               

               Conread position:
               3-322
               

               Cow position:
               chr21:33350643-33350956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 9
               

               Conread position:
               4-312
               

               Cow position:
               chr21:47764221-47763913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               5, 19
               

               Conread position:
               4-322
               

               Cow position:
               chr21:29069439-29069115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 20
               

               Conread position:
               6-249
               

               Cow position:
               chr21:4795118-4795362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 58
               

               Conread position:
               6-287
               

               Cow position:
               chr21:25764538-25764815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               100, 6
               

               Conread position:
               6-298
               

               Cow position:
               chr21:81974-82258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               212
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               27, 9
               

               Conread position:
               6-314
               

               Cow position:
               chr21:11645076-11644758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 17
               

               Conread position:
               6-320
               

               Cow position:
               chr21:29214256-29213949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               217
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               6-322
               

               Cow position:
               chr21:3585467-3585156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               91, 17
               

               Conread position:
               6-322
               

               Cow position:
               chr21:14452128-14452445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               5, 18
               

               Conread position:
               8-273
               

               Cow position:
               chr21:18845117-18844845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               98, 5
               

               Conread position:
               9-252
               

               Cow position:
               chr21:47067001-47066756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               23, 14
               

               Conread position:
               9-258
               

               Cow position:
               chr21:20192794-20193045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               24, 133
               

               Conread position:
               9-277
               

               Cow position:
               chr21:38120999-38121271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 132
               

               Conread position:
               9-300
               

               Cow position:
               chr21:15584522-15584224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               21, 57
               

               Conread position:
               10-295
               

               Cow position:
               chr21:15611054-15611331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               63, 23
               

               Conread position:
               10-302
               

               Cow position:
               chr21:28924013-28924305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               23, 13
               

               Conread position:
               10-302
               

               Cow position:
               chr21:41590660-41590370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 13
               

               Conread position:
               10-311
               

               Cow position:
               chr21:29484880-29485182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 23
               

               Conread position:
               10-322
               

               Cow position:
               chr21:37706515-37706204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               11-278
               

               Cow position:
               chr21:2679460-2679719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               97, 14
               

               Conread position:
               11-282
               

               Cow position:
               chr21:28442646-28442907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               11-293
               

               Cow position:
               chr21:1058978-1059262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               56, 12
               

               Conread position:
               11-301
               

               Cow position:
               chr21:39403637-39403331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               11-311
               

               Cow position:
               chr21:30256366-30256070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               47, 16
               

               Conread position:
               11-313
               

               Cow position:
               chr21:25382913-25383231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               54, 305
               

               Conread position:
               11-314
               

               Cow position:
               chr21:45906721-45906413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               97, 153
               

               Conread position:
               11-320
               

               Cow position:
               chr21:11359939-11360238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               13-316
               

               Cow position:
               chr21:35437563-35437280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               209
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               190, 77
               

               Conread position:
               17-305
               

               Cow position:
               chr21:10410123-10410420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 152
               

               Conread position:
               18-308
               

               Cow position:
               chr21:18800625-18800333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               218
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               14, 118
               

               Conread position:
               19-302
               

               Cow position:
               chr21:643237-643519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 11
               

               Conread position:
               25-306
               

               Cow position:
               chr21:46849212-46848929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               43, 124
               

               Conread position:
               27-263
               

               Cow position:
               chr21:19363547-19363304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               63, 119
               

               Conread position:
               27-287
               

               Cow position:
               chr21:45262896-45262630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               59, 117
               

               Conread position:
               27-305
               

               Cow position:
               chr21:6051423-6051699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               78, 117
               

               Conread position:
               27-306
               

               Cow position:
               chr21:10004969-10004687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               81, 22
               

               Conread position:
               27-322
               

               Cow position:
               chr21:10263949-10264243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               61, 121
               

               Conread position:
               27-322
               

               Cow position:
               chr21:32297591-32297300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               252, 73
               

               Conread position:
               27-322
               

               Cow position:
               chr21:44251919-44251632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               28-298
               

               Cow position:
               chr21:14760490-14760756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               38, 117
               

               Conread position:
               28-308
               

               Cow position:
               chr21:1591469-1591746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               80, 115
               

               Conread position:
               29-276
               

               Cow position:
               chr21:21223211-21223450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               29-276
               

               Cow position:
               chr21:44214042-44214295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 119
               

               Conread position:
               29-277
               

               Cow position:
               chr21:15911317-15911570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               48, 117
               

               Conread position:
               29-302
               

               Cow position:
               chr21:38900696-38900967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               95, 113
               

               Conread position:
               29-311
               

               Cow position:
               chr21:39401512-39401790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               78, 119
               

               Conread position:
               29-312
               

               Cow position:
               chr21:34010478-34010193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               71, 32
               

               Conread position:
               30-277
               

               Cow position:
               chr21:44515182-44515442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               45, 111
               

               Conread position:
               30-282
               

               Cow position:
               chr21:12723079-12723328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               78, 54
               

               Conread position:
               30-304
               

               Cow position:
               chr21:802376-802120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               31-268
               

               Cow position:
               chr21:20418765-20418521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               34, 120
               

               Conread position:
               32-194
               

               Cow position:
               chr21:12960978-12960810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               76, 111
               

               Conread position:
               32-205
               

               Cow position:
               chr21:18041927-18041749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               75, 117
               

               Conread position:
               32-226
               

               Cow position:
               chr21:23150100-23149902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               46, 106
               

               Conread position:
               32-228
               

               Cow position:
               chr21:17856468-17856665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               41, 28
               

               Conread position:
               32-237
               

               Cow position:
               chr21:13488443-13488657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               32-243
               

               Cow position:
               chr21:24131001-24131205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 52
               

               Conread position:
               32-256
               

               Cow position:
               chr21:34391054-34390826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 114
               

               Conread position:
               32-269
               

               Cow position:
               chr21:9940273-9940028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               53, 122
               

               Conread position:
               32-273
               

               Cow position:
               chr21:24598582-24598824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 100
               

               Conread position:
               32-275
               

               Cow position:
               chr21:42540295-42540053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 108
               

               Conread position:
               32-277
               

               Cow position:
               chr21:28211122-28211361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               63, 98
               

               Conread position:
               32-277
               

               Cow position:
               chr21:35354454-35354703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               72, 107
               

               Conread position:
               32-277
               

               Cow position:
               chr21:47215260-47215025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               76, 82
               

               Conread position:
               32-278
               

               Cow position:
               chr21:724965-724708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               199
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               51, 45
               

               Conread position:
               32-282
               

               Cow position:
               chr21:28626161-28626412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               76, 109
               

               Conread position:
               32-282
               

               Cow position:
               chr21:30990349-30990112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               32-282
               

               Cow position:
               chr21:31090499-31090260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               72, 85
               

               Conread position:
               32-282
               

               Cow position:
               chr21:33210123-33210363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               134, 76
               

               Conread position:
               32-285
               

               Cow position:
               chr21:10561663-10561406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               72, 109
               

               Conread position:
               32-287
               

               Cow position:
               chr21:395791-396047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               73, 110
               

               Conread position:
               32-287
               

               Cow position:
               chr21:10000995-10001255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 115
               

               Conread position:
               32-287
               

               Cow position:
               chr21:20260400-20260140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               72, 109
               

               Conread position:
               32-291
               

               Cow position:
               chr21:18828385-18828120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               76, 40
               

               Conread position:
               32-291
               

               Cow position:
               chr21:27229874-27229611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 111
               

               Conread position:
               32-292
               

               Cow position:
               chr21:42348753-42348511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               32-293
               

               Cow position:
               chr21:10673052-10673307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               241, 28
               

               Conread position:
               32-294
               

               Cow position:
               chr21:30592383-30592122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               75, 109
               

               Conread position:
               32-295
               

               Cow position:
               chr21:7673047-7673308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               79, 116
               

               Conread position:
               32-295
               

               Cow position:
               chr21:31691403-31691670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               200
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               76, 113
               

               Conread position:
               32-296
               

               Cow position:
               chr21:44565786-44565533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               98, 46
               

               Conread position:
               32-297
               

               Cow position:
               chr21:12462049-12461773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               75, 115
               

               Conread position:
               32-297
               

               Cow position:
               chr21:15976553-15976822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               26, 113
               

               Conread position:
               32-297
               

               Cow position:
               chr21:26648086-26647826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               10, 117
               

               Conread position:
               32-297
               

               Cow position:
               chr21:29002237-29001967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               73, 114
               

               Conread position:
               32-297
               

               Cow position:
               chr21:33982884-33982617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               76, 29
               

               Conread position:
               32-297
               

               Cow position:
               chr21:48234238-48233975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               76, 17
               

               Conread position:
               32-298
               

               Cow position:
               chr21:31253464-31253728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               33, 77
               

               Conread position:
               32-301
               

               Cow position:
               chr21:4399718-4399997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               33, 127
               

               Conread position:
               32-301
               

               Cow position:
               chr21:17643046-17642792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 55
               

               Conread position:
               32-301
               

               Cow position:
               chr21:30222265-30222539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 63
               

               Conread position:
               32-302
               

               Cow position:
               chr21:3361090-3360820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               67, 8
               

               Conread position:
               32-302
               

               Cow position:
               chr21:6833969-6834246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               31, 114
               

               Conread position:
               32-302
               

               Cow position:
               chr21:23586801-23587076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               75, 117
               

               Conread position:
               32-305
               

               Cow position:
               chr21:28733991-28733715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               56, 31
               

               Conread position:
               32-305
               

               Cow position:
               chr21:42414180-42413900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               7, 119
               

               Conread position:
               32-306
               

               Cow position:
               chr21:29978835-29978560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               47, 114
               

               Conread position:
               32-306
               

               Cow position:
               chr21:37299390-37299661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               65, 27
               

               Conread position:
               32-308
               

               Cow position:
               chr21:9990437-9990711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               76, 111
               

               Conread position:
               32-309
               

               Cow position:
               chr21:30250269-30250002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 98
               

               Conread position:
               32-310
               

               Cow position:
               chr21:42841677-42841394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               34, 111
               

               Conread position:
               32-311
               

               Cow position:
               chr21:7581985-7581701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               69, 113
               

               Conread position:
               32-311
               

               Cow position:
               chr21:18790639-18790362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               26, 108
               

               Conread position:
               32-311
               

               Cow position:
               chr21:24642439-24642724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               33, 120
               

               Conread position:
               32-311
               

               Cow position:
               chr21:27569239-27568968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 38
               

               Conread position:
               32-311
               

               Cow position:
               chr21:27624630-27624903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               204, 73
               

               Conread position:
               32-311
               

               Cow position:
               chr21:36795521-36795811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               76, 117
               

               Conread position:
               32-312
               

               Cow position:
               chr21:12801826-12801536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 108
               

               Conread position:
               32-316
               

               Cow position:
               chr21:42135699-42135407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 134
               

               Conread position:
               32-318
               

               Cow position:
               chr21:12617058-12617371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               76, 275
               

               Conread position:
               32-320
               

               Cow position:
               chr21:44825964-44825668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 123
               

               Conread position:
               32-321
               

               Cow position:
               chr21:11740195-11739910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               54, 104
               

               Conread position:
               32-322
               

               Cow position:
               chr21:20152868-20153165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               31, 123
               

               Conread position:
               32-322
               

               Cow position:
               chr21:23322159-23321863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               25, 120
               

               Conread position:
               32-322
               

               Cow position:
               chr21:27810329-27810600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               76, 109
               

               Conread position:
               32-322
               

               Cow position:
               chr21:41974454-41974159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               76, 169
               

               Conread position:
               33-284
               

               Cow position:
               chr21:22860921-22861178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               75, 106
               

               Conread position:
               33-287
               

               Cow position:
               chr21:22465119-22465370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               33-298
               

               Cow position:
               chr21:27863594-27863323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               30, 127
               

               Conread position:
               33-301
               

               Cow position:
               chr21:19258751-19259013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               35, 106
               

               Conread position:
               33-301
               

               Cow position:
               chr21:37479881-37480159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               75, 102
               

               Conread position:
               33-304
               

               Cow position:
               chr21:2657742-2658006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               236, 31
               

               Conread position:
               33-304
               

               Cow position:
               chr21:42022212-42022472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               255, 52
               

               Conread position:
               33-306
               

               Cow position:
               chr21:17183842-17184116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               35, 119
               

               Conread position:
               33-308
               

               Cow position:
               chr21:13365260-13365545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               214
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               75, 131
               

               Conread position:
               33-311
               

               Cow position:
               chr21:42384431-42384713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               34, 113
               

               Conread position:
               33-314
               

               Cow position:
               chr21:45330026-45329746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               36, 113
               

               Conread position:
               33-322
               

               Cow position:
               chr21:20160605-20160887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               40, 31
               

               Conread position:
               34-224
               

               Cow position:
               chr21:23192591-23192392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               74, 105
               

               Conread position:
               34-257
               

               Cow position:
               chr21:16187885-16187657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               70, 106
               

               Conread position:
               34-294
               

               Cow position:
               chr21:34654000-34654260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               201
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               74, 33
               

               Conread position:
               34-297
               

               Cow position:
               chr21:5898476-5898211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               74, 91
               

               Conread position:
               34-302
               

               Cow position:
               chr21:36297413-36297689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               70, 114
               

               Conread position:
               34-322
               

               Cow position:
               chr21:23535636-23535920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               31, 109
               

               Conread position:
               35-241
               

               Cow position:
               chr21:10601450-10601241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               35-286
               

               Cow position:
               chr21:46552182-46551922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               33, 107
               

               Conread position:
               35-287
               

               Cow position:
               chr21:28190956-28191212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               60, 117
               

               Conread position:
               35-296
               

               Cow position:
               chr21:16569825-16570087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               72, 108
               

               Conread position:
               35-297
               

               Cow position:
               chr21:28989538-28989804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               72, 108
               

               Conread position:
               35-302
               

               Cow position:
               chr21:9416170-9416446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               27, 117
               

               Conread position:
               35-306
               

               Cow position:
               chr21:26244844-26245113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               68, 108
               

               Conread position:
               35-308
               

               Cow position:
               chr21:30835286-30835564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               24, 121
               

               Conread position:
               35-314
               

               Cow position:
               chr21:30849023-30848740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               73, 9
               

               Conread position:
               35-318
               

               Cow position:
               chr21:36909858-36910142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               23, 74
               

               Conread position:
               35-322
               

               Cow position:
               chr21:20262409-20262136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               71, 54
               

               Conread position:
               36-298
               

               Cow position:
               chr21:41579676-41579949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               29, 115
               

               Conread position:
               36-301
               

               Cow position:
               chr21:4280747-4280481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               59, 104
               

               Conread position:
               36-303
               

               Cow position:
               chr21:33263774-33264040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 101
               

               Conread position:
               36-306
               

               Cow position:
               chr21:32339813-32339541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               29, 114
               

               Conread position:
               36-310
               

               Cow position:
               chr21:45473832-45473554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 77
               

               Conread position:
               36-312
               

               Cow position:
               chr21:33645-33924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               29, 110
               

               Conread position:
               36-322
               

               Cow position:
               chr21:46962-47255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               71, 115
               

               Conread position:
               36-322
               

               Cow position:
               chr21:24858240-24858524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 103
               

               Conread position:
               37-308
               

               Cow position:
               chr21:47719373-47719100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 197
               

               Conread position:
               37-309
               

               Cow position:
               chr21:46264098-46264372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               205
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               65, 103
               

               Conread position:
               37-314
               

               Cow position:
               chr21:6713599-6713316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               71, 44
               

               Conread position:
               38-293
               

               Cow position:
               chr21:33414158-33413902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               70, 113
               

               Conread position:
               39-297
               

               Cow position:
               chr21:40266049-40266313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               22, 114
               

               Conread position:
               39-298
               

               Cow position:
               chr21:1511219-1511480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               69, 112
               

               Conread position:
               39-315
               

               Cow position:
               chr21:8349256-8349534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               69, 106
               

               Conread position:
               40-314
               

               Cow position:
               chr21:641512-641792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 111
               

               Conread position:
               41-275
               

               Cow position:
               chr21:8125868-8125637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               18, 69
               

               Conread position:
               42-313
               

               Cow position:
               chr21:5392608-5392329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               66, 10
               

               Conread position:
               46-297
               

               Cow position:
               chr21:32559424-32559175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               53, 84
               

               Conread position:
               48-277
               

               Cow position:
               chr21:297689-297924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               5, 92
               

               Conread position:
               49-296
               

               Cow position:
               chr21:8426379-8426634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               35, 95
               

               Conread position:
               54-322
               

               Cow position:
               chr21:868982-868711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               56, 95
               

               Conread position:
               55-322
               

               Cow position:
               chr21:829258-829002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               93, 27
               

               Conread position:
               57-322
               

               Cow position:
               chr21:22014133-22014399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               43, 87
               

               Conread position:
               74-298
               

               Cow position:
               chr21:674655-674864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               80-315
               

               Cow position:
               chr21:7169663-7169896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               25, 10
               

               Conread position:
               85-308
               

               Cow position:
               chr21:29014580-29014357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               193, 58
               

               Conread position:
               86-276
               

               Cow position:
               chr21:12104346-12104535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               21, 48
               

               Conread position:
               89-304
               

               Cow position:
               chr21:9334470-9334685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 36
               

               Conread position:
               91-311
               

               Cow position:
               chr21:7268894-7268678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               188, 13
               

               Conread position:
               93-302
               

               Cow position:
               chr21:21615764-21615975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               33, 195
               

               Conread position:
               94-254
               

               Cow position:
               chr21:46143949-46144106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               94-281
               

               Cow position:
               chr21:6387991-6388173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 41
               

               Conread position:
               94-298
               

               Cow position:
               chr21:30980587-30980387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               94-301
               

               Cow position:
               chr21:742276-742471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               94-301
               

               Cow position:
               chr21:28030279-28030482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               94-309
               

               Cow position:
               chr21:10633649-10633441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               36, 48
               

               Conread position:
               94-314
               

               Cow position:
               chr21:7768425-7768643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               35, 49
               

               Conread position:
               94-320
               

               Cow position:
               chr21:13585063-13584846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               180, 47
               

               Conread position:
               94-322
               

               Cow position:
               chr21:9256666-9256445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               187, 46
               

               Conread position:
               94-322
               

               Cow position:
               chr21:17193762-17193540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               133, 48
               

               Conread position:
               94-322
               

               Cow position:
               chr21:28237721-28237491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               35, 109
               

               Conread position:
               95-305
               

               Cow position:
               chr21:471669-471874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               186, 31
               

               Conread position:
               96-269
               

               Cow position:
               chr21:20183064-20183233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               101-301
               

               Cow position:
               chr21:47160215-47160413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               185, 14
               

               Conread position:
               101-322
               

               Cow position:
               chr21:71583-71794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               104-254
               

               Cow position:
               chr21:46599360-46599508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               104-274
               

               Cow position:
               chr21:40192300-40192137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               104-297
               

               Cow position:
               chr21:14126288-14126469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               185, 29
               

               Conread position:
               104-314
               

               Cow position:
               chr21:7394284-7394081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               187, 31
               

               Conread position:
               104-314
               

               Cow position:
               chr21:19240876-19240665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               29, 40
               

               Conread position:
               105-322
               

               Cow position:
               chr21:41522405-41522200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               106-302
               

               Cow position:
               chr21:36508244-36508429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               106-322
               

               Cow position:
               chr21:38720255-38720460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               106-322
               

               Cow position:
               chr21:47363735-47363514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               95, 35
               

               Conread position:
               113-292
               

               Cow position:
               chr21:41046814-41046991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               113-311
               

               Cow position:
               chr21:19360167-19359972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               114-296
               

               Cow position:
               chr21:19868946-19868766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               32, 16
               

               Conread position:
               114-311
               

               Cow position:
               chr21:36682332-36682529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               154
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               122-314
               

               Cow position:
               chr21:41287775-41287588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               129-302
               

               Cow position:
               chr21:43259242-43259414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               130-314
               

               Cow position:
               chr21:31279280-31279461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               131-282
               

               Cow position:
               chr21:22850948-22851096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               148, 11
               

               Conread position:
               132-309
               

               Cow position:
               chr21:11057854-11057681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               16, 78
               

               Conread position:
               132-322
               

               Cow position:
               chr21:17252953-17252769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               133-305
               

               Cow position:
               chr21:28907518-28907348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               104, 76
               

               Conread position:
               137-291
               

               Cow position:
               chr21:46451922-46451770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               137-320
               

               Cow position:
               chr21:9418125-9417939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               139, 72
               

               Conread position:
               138-302
               

               Cow position:
               chr21:16498550-16498711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               142-302
               

               Cow position:
               chr21:24875386-24875548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               142-302
               

               Cow position:
               chr21:39393783-39393944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               143-297
               

               Cow position:
               chr21:6851208-6851362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               143-322
               

               Cow position:
               chr21:41610203-41610387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               145-311
               

               Cow position:
               chr21:7088638-7088808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               145-311
               

               Cow position:
               chr21:44592171-44592004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               146-322
               

               Cow position:
               chr21:20163747-20163916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               152-311
               

               Cow position:
               chr21:5342049-5341889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               154-297
               

               Cow position:
               chr21:25014979-25014843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               156-298
               

               Cow position:
               chr21:8625227-8625364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               156-314
               

               Cow position:
               chr21:30243632-30243477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               158-302
               

               Cow position:
               chr21:14228229-14228085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               163-298
               

               Cow position:
               chr21:15012495-15012630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               163-301
               

               Cow position:
               chr21:25012138-25012275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               163-307
               

               Cow position:
               chr21:40820797-40820654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               163-314
               

               Cow position:
               chr21:5486458-5486298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               163-322
               

               Cow position:
               chr21:38692256-38692413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               144, 46
               

               Conread position:
               166-322
               

               Cow position:
               chr21:46767179-46767336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               124, 43
               

               Conread position:
               167-297
               

               Cow position:
               chr21:20174378-20174508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               167-298
               

               Cow position:
               chr21:13043961-13043829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 31
               

               Conread position:
               169-302
               

               Cow position:
               chr21:30657932-30658065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               174-301
               

               Cow position:
               chr21:11182620-11182747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               100, 91
               

               Conread position:
               174-322
               

               Cow position:
               chr21:17790891-17790746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               176-305
               

               Cow position:
               chr21:30622708-30622836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               178-311
               

               Cow position:
               chr21:11363737-11363870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 92
               

               Conread position:
               179-321
               

               Cow position:
               chr21:8986094-8986233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               180-302
               

               Cow position:
               chr21:8506473-8506351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               180-302
               

               Cow position:
               chr21:8509361-8509239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               187-322
               

               Cow position:
               chr21:27744105-27744237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               190-322
               

               Cow position:
               chr21:41957128-41957003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               200-314
               

               Cow position:
               chr21:40930382-40930268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               204-322
               

               Cow position:
               chr21:39845690-39845810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               40, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-314
Cow position:	chr21:38449560-38449244 (view UCSC Genome Browser custom track)
Alignm length:	326
Alignm identity:	215
Alignm E-value:	8e-27
Alignm gaps (pig, cow):	31, 22
Conread position:	1-322
Cow position:	chr21:22718893-22718573 (view UCSC Genome Browser custom track)
Alignm length:	329
Alignm identity:	217
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	23, 147
Conread position:	2-278
Cow position:	chr21:30607190-30606914 (view UCSC Genome Browser custom track)
Alignm length:	282
Alignm identity:	185
Alignm E-value:	6e-24
Alignm gaps (pig, cow):	11, 53
Conread position:	3-322
Cow position:	chr21:33350643-33350956 (view UCSC Genome Browser custom track)
Alignm length:	323
Alignm identity:	237
Alignm E-value:	0
Alignm gaps (pig, cow):	103, 9
Conread position:	4-312
Cow position:	chr21:47764221-47763913 (view UCSC Genome Browser custom track)
Alignm length:	318
Alignm identity:	220
Alignm E-value:	7e-37
Alignm gaps (pig, cow):	5, 19
Conread position:	4-322
Cow position:	chr21:29069439-29069115 (view UCSC Genome Browser custom track)
Alignm length:	333
Alignm identity:	244
Alignm E-value:	0
Alignm gaps (pig, cow):	7, 20
Conread position:	6-249
Cow position:	chr21:4795118-4795362 (view UCSC Genome Browser custom track)
Alignm length:	252
Alignm identity:	173
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	18, 58
Conread position:	6-287
Cow position:	chr21:25764538-25764815 (view UCSC Genome Browser custom track)
Alignm length:	285
Alignm identity:	200
Alignm E-value:	2e-37
Alignm gaps (pig, cow):	100, 6
Conread position:	6-298
Cow position:	chr21:81974-82258 (view UCSC Genome Browser custom track)
Alignm length:	294
Alignm identity:	212
Alignm E-value:	5.60519e-45
Alignm gaps (pig, cow):	27, 9
Conread position:	6-314
Cow position:	chr21:11645076-11644758 (view UCSC Genome Browser custom track)
Alignm length:	320
Alignm identity:	233
Alignm E-value:	0
Alignm gaps (pig, cow):	30, 17
Conread position:	6-320
Cow position:	chr21:29214256-29213949 (view UCSC Genome Browser custom track)
Alignm length:	315
Alignm identity:	217
Alignm E-value:	3.99931e-42
Alignm gaps (pig, cow):	113, 0
Conread position:	6-322
Cow position:	chr21:3585467-3585156 (view UCSC Genome Browser custom track)
Alignm length:	321
Alignm identity:	220
Alignm E-value:	9e-39
Alignm gaps (pig, cow):	91, 17
Conread position:	8-273
Cow position:	chr21:18845117-18844845 (view UCSC Genome Browser custom track)
Alignm length:	275
Alignm identity:	188
Alignm E-value:	4e-32
Alignm gaps (pig, cow):	98, 5
Conread position:	9-252
Cow position:	chr21:47067001-47066756 (view UCSC Genome Browser custom track)
Alignm length:	254
Alignm identity:	172
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	23, 14
Conread position:	9-258
Cow position:	chr21:20192794-20193045 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	180
Alignm E-value:	3e-29
Alignm gaps (pig, cow):	24, 133
Conread position:	9-277
Cow position:	chr21:38120999-38121271 (view UCSC Genome Browser custom track)
Alignm length:	275
Alignm identity:	210
Alignm E-value:	0
Alignm gaps (pig, cow):	91, 132
Conread position:	9-300
Cow position:	chr21:15584522-15584224 (view UCSC Genome Browser custom track)
Alignm length:	304
Alignm identity:	204
Alignm E-value:	9e-28
Alignm gaps (pig, cow):	21, 57
Conread position:	10-295
Cow position:	chr21:15611054-15611331 (view UCSC Genome Browser custom track)
Alignm length:	290
Alignm identity:	195
Alignm E-value:	8e-27
Alignm gaps (pig, cow):	63, 23
Conread position:	10-302
Cow position:	chr21:28924013-28924305 (view UCSC Genome Browser custom track)
Alignm length:	300
Alignm identity:	207
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	23, 13
Conread position:	10-311
Cow position:	chr21:29484880-29485182 (view UCSC Genome Browser custom track)
Alignm length:	310
Alignm identity:	234
Alignm E-value:	0
Alignm gaps (pig, cow):	98, 23