Cow genome map
| Conread name: | rebs29c_p4.y1 |
| Conread position: | 13-503 |
| Cow position: | chr14:3061224-3060737 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 31 |
| Conread position: | 39-502 |
| Cow position: | chr14:433936-434393 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 288 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 46-510 |
| Cow position: | chr14:3061780-3061319 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 294 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 313, 19 |
| Conread position: | 76-388 |
| Cow position: | chr14:663411-663102 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 9 |
| Conread position: | 87-472 |
| Cow position: | chr14:663486-663102 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 123, 12 |
| Conread position: | 87-509 |
| Cow position: | chr14:433810-434232 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 42 |
| Conread position: | 89-463 |
| Cow position: | chr14:680226-680599 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 305, 10 |
| Conread position: | 91-466 |
| Cow position: | chr14:3080170-3079795 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 91-466 |
| Cow position: | chr14:3080926-3080551 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 268, 274 |
| Conread position: | 92-411 |
| Cow position: | chr14:447930-448249 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 92-418 |
| Cow position: | chr14:3127597-3127271 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 92-427 |
| Cow position: | chr14:3080001-3079666 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 209, 229 |
| Conread position: | 92-427 |
| Cow position: | chr14:3155498-3155833 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 129, 110 |
| Conread position: | 92-436 |
| Cow position: | chr14:3080085-3079741 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 293, 305 |
| Conread position: | 92-441 |
| Cow position: | chr14:680900-681249 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 92-450 |
| Cow position: | chr14:3061568-3061210 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 56, 62 |
| Conread position: | 92-462 |
| Cow position: | chr14:3128101-3127731 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 48, 53 |
| Conread position: | 92-462 |
| Cow position: | chr14:25895707-25896077 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 62 |
| Conread position: | 92-463 |
| Cow position: | chr14:3080337-3079966 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 304, 293 |
| Conread position: | 92-463 |
| Cow position: | chr14:25895119-25895490 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 248 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 123, 139 |
| Conread position: | 92-463 |
| Cow position: | chr14:25895455-25895826 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 37, 57 |
| Conread position: | 92-466 |
| Cow position: | chr14:433899-434273 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 110 |
| Conread position: | 92-466 |
| Cow position: | chr14:3080421-3080047 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 249 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 216, 225 |
| Conread position: | 92-466 |
| Cow position: | chr14:3127933-3127559 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 92-466 |
| Cow position: | chr14:3155414-3155788 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 47, 62 |
| Conread position: | 92-467 |
| Cow position: | chr14:25895371-25895746 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 123, 144 |
| Conread position: | 92-470 |
| Cow position: | chr14:3127849-3127471 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 219, 209 |
| Conread position: | 92-470 |
| Cow position: | chr14:25895623-25896001 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 137, 144 |
| Conread position: | 92-478 |
| Cow position: | chr14:3156155-3156543 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 251 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 117, 110 |
| Conread position: | 92-493 |
| Cow position: | chr14:3061232-3060831 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 206, 217 |
| Conread position: | 92-501 |
| Cow position: | chr14:25895035-25895444 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 222, 206 |
| Conread position: | 92-503 |
| Cow position: | chr14:447678-448089 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 247 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 92-503 |
| Cow position: | chr14:3080253-3079842 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 223, 212 |
| Conread position: | 92-503 |
| Cow position: | chr14:25895791-25896202 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 37, 51 |
| Conread position: | 92-504 |
| Cow position: | chr14:3061064-3060652 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 268 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 220, 216 |
| Conread position: | 92-507 |
| Cow position: | chr14:3061316-3060901 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 126, 110 |
| Conread position: | 92-507 |
| Cow position: | chr14:3080757-3080342 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 267 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 44, 39 |
| Conread position: | 92-507 |
| Cow position: | chr14:25895287-25895702 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 92-509 |
| Cow position: | chr14:25894951-25895368 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 266 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 165, 152 |
| Conread position: | 92-510 |
| Cow position: | chr14:447594-448011 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 214, 225 |
| Conread position: | 92-510 |
| Cow position: | chr14:3061484-3061067 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 266 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 220, 214 |
| Conread position: | 92-531 |
| Cow position: | chr14:3080589-3080151 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 413, 0 |
| Conread position: | 94-454 |
| Cow position: | chr14:447764-448124 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 45, 53 |
| Conread position: | 94-456 |
| Cow position: | chr14:680734-681096 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 291, 299 |
| Conread position: | 94-463 |
| Cow position: | chr14:680566-680935 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-466 |
| Cow position: | chr14:447848-448220 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 224, 209 |
| Conread position: | 94-503 |
| Cow position: | chr14:3061650-3061241 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 263 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 118, 128 |
| Conread position: | 94-507 |
| Cow position: | chr14:680398-680811 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 49 |
| Conread position: | 94-507 |
| Cow position: | chr14:680482-680895 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-510 |
| Cow position: | chr14:3080503-3080088 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 267 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 294, 302 |
| Conread position: | 98-491 |
| Cow position: | chr14:680654-681047 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 41, 45 |
| Conread position: | 103-466 |
| Cow position: | chr14:3080830-3080467 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 291, 285 |
| Conread position: | 103-466 |
| Cow position: | chr14:3156082-3156445 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 218, 211 |
| Conread position: | 113-507 |
| Cow position: | chr14:25895560-25895954 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 151-463 |
| Cow position: | chr14:25894926-25895238 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 152-463 |
| Cow position: | chr14:447570-447881 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 230, 249 |
| Conread position: | 152-470 |
| Cow position: | chr14:3127621-3127303 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 167, 152 |
| Conread position: | 170-503 |
| Cow position: | chr14:447505-447837 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 304, 5 |
| Conread position: | 175-503 |
| Cow position: | chr14:663482-663155 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 164, 8 |
| Conread position: | 197-503 |
| Cow position: | chr14:3128164-3127858 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 51, 47 |
| Conread position: | 220-507 |
| Cow position: | chr14:433775-434062 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 25, 35 |
Show alignments to all cow chromosomes.