Cow genome map
| Conread name: | rebs29c_p4.y1 |
| Conread position: | 1-261 |
| Cow position: | chr4:65546440-65546181 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 1-433 |
| Cow position: | chr4:65121697-65122130 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 261 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 6, 13 |
| Conread position: | 1-433 |
| Cow position: | chr4:65702885-65702452 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 278 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 9, 87 |
| Conread position: | 3-503 |
| Cow position: | chr4:65350292-65350792 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 328 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 7, 14 |
| Conread position: | 8-503 |
| Cow position: | chr4:65350049-65350540 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 316 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 7, 79 |
| Conread position: | 19-545 |
| Cow position: | chr4:65703656-65703135 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 68 |
| Conread position: | 20-453 |
| Cow position: | chr4:65146350-65146785 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 36-340 |
| Cow position: | chr4:65157882-65158182 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 16, 7 |
| Conread position: | 55-472 |
| Cow position: | chr4:65121586-65122000 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 271 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 178, 30 |
| Conread position: | 59-509 |
| Cow position: | chr4:65349928-65350381 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 293 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 21, 81 |
| Conread position: | 61-472 |
| Cow position: | chr4:65702905-65702495 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 28, 8 |
| Conread position: | 66-507 |
| Cow position: | chr4:65703438-65703000 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 282 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 17, 10 |
| Conread position: | 70-507 |
| Cow position: | chr4:65350029-65350463 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 71-421 |
| Cow position: | chr4:65350450-65350794 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 177, 14 |
| Conread position: | 75-524 |
| Cow position: | chr4:65121690-65122136 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 162, 7 |
| Conread position: | 76-345 |
| Cow position: | chr4:65546445-65546181 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 87, 11 |
| Conread position: | 76-507 |
| Cow position: | chr4:65350203-65350628 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 54, 8 |
| Conread position: | 79-280 |
| Cow position: | chr4:65495307-65495107 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 186, 15 |
| Conread position: | 79-519 |
| Cow position: | chr4:65495035-65494590 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 432 |
| Conread position: | 81-552 |
| Cow position: | chr4:65261564-65261089 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 449 |
| Conread position: | 82-503 |
| Cow position: | chr4:65261730-65261306 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 275 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 60, 48 |
| Conread position: | 92-503 |
| Cow position: | chr4:65703664-65703253 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-427 |
| Cow position: | chr4:65494762-65494429 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 95-503 |
| Cow position: | chr4:65261630-65261222 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 66 |
| Conread position: | 99-529 |
| Cow position: | chr4:65121543-65121973 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 272 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 30, 44 |
| Conread position: | 112-535 |
| Cow position: | chr4:65494828-65494400 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 145 |
| Conread position: | 159-429 |
| Cow position: | chr4:65546450-65546181 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 6, 25 |
| Conread position: | 170-548 |
| Cow position: | chr4:65401864-65402247 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 171-536 |
| Cow position: | chr4:65157836-65158209 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 248 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 81, 361 |
| Conread position: | 172-472 |
| Cow position: | chr4:65703668-65703368 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 126, 136 |
| Conread position: | 173-507 |
| Cow position: | chr4:65702878-65702544 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 138, 113 |
| Conread position: | 173-548 |
| Cow position: | chr4:65146420-65146792 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 255 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 247, 263 |
| Conread position: | 229-546 |
| Cow position: | chr4:65495326-65495007 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 204, 191 |
| Conread position: | 249-519 |
| Cow position: | chr4:65703676-65703406 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 10, 144 |
| Conread position: | 252-541 |
| Cow position: | chr4:65702883-65702592 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 132, 136 |
| Conread position: | 253-472 |
| Cow position: | chr4:65121136-65121355 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-489 |
| Cow position: | chr4:65146417-65146655 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 223, 0 |
| Conread position: | 328-551 |
| Cow position: | chr4:65546365-65546142 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 65, 54 |
| Conread position: | 333-503 |
| Cow position: | chr4:65121132-65121302 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.