Cow genome map
| Conread name: | rebs31c_k1.y1 |
| Conread position: | 1-592 |
| Cow position: | chr11:8265430-8266049 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 181 |
| Conread position: | 1-592 |
| Cow position: | chr11:22934680-22934078 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 167 |
| Conread position: | 1-600 |
| Cow position: | chr11:38575575-38574955 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 209 |
| Conread position: | 1-607 |
| Cow position: | chr11:59627422-59626801 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 107 |
| Conread position: | 2-379 |
| Cow position: | chr11:64384833-64385211 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 98 |
| Conread position: | 2-592 |
| Cow position: | chr11:49172589-49171981 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 36 |
| Conread position: | 10-396 |
| Cow position: | chr11:12095714-12096105 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 91 |
| Conread position: | 10-573 |
| Cow position: | chr11:85732108-85731516 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 124 |
| Conread position: | 10-592 |
| Cow position: | chr11:15994092-15994679 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 36 |
| Conread position: | 10-607 |
| Cow position: | chr11:4054375-4053777 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 35 |
| Conread position: | 10-607 |
| Cow position: | chr11:7109486-7108889 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 197 |
| Conread position: | 10-607 |
| Cow position: | chr11:28392811-28393427 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 84 |
| Conread position: | 10-607 |
| Cow position: | chr11:73467506-73466886 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 208 |
| Conread position: | 11-592 |
| Cow position: | chr11:19100561-19099964 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 195 |
| Conread position: | 11-592 |
| Cow position: | chr11:42371741-42372344 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 171 |
| Conread position: | 11-592 |
| Cow position: | chr11:44253999-44254594 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 159 |
| Conread position: | 11-607 |
| Cow position: | chr11:2834203-2834810 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 111 |
| Conread position: | 14-384 |
| Cow position: | chr11:21137979-21138334 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 205, 24 |
| Conread position: | 14-606 |
| Cow position: | chr11:4061933-4061358 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 44 |
| Conread position: | 20-607 |
| Cow position: | chr11:21897748-21897157 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 33 |
| Conread position: | 22-524 |
| Cow position: | chr11:39805650-39806161 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 159 |
| Conread position: | 22-593 |
| Cow position: | chr11:74346349-74346926 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 68 |
| Conread position: | 96-524 |
| Cow position: | chr11:46778482-46778046 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 309 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 54, 124 |
| Conread position: | 154-384 |
| Cow position: | chr11:14735275-14735045 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 67, 52 |
| Conread position: | 184-607 |
| Cow position: | chr11:34022074-34022482 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 292 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 34, 22 |
| Conread position: | 185-355 |
| Cow position: | chr11:65159796-65159967 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 21 |
| Conread position: | 250-606 |
| Cow position: | chr11:77435731-77436089 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 53, 67 |
| Conread position: | 289-607 |
| Cow position: | chr11:17834363-17834041 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 133, 66 |
| Conread position: | 294-543 |
| Cow position: | chr11:33104682-33104939 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 14, 63 |
| Conread position: | 310-545 |
| Cow position: | chr11:14468752-14468981 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 323-607 |
| Cow position: | chr11:54482131-54481842 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 59, 32 |
Show alignments to all cow chromosomes.