Cow genome map

Conread name: rebs31c_k1.y1

Conread position: 1-592
Cow position: chr6:43791410-43790800 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 137

Conread position: 1-607
Cow position: chr6:40159326-40158721 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 137

Conread position: 2-385
Cow position: chr6:37478396-37478778 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 139

Conread position: 9-607
Cow position: chr6:6162305-6162923 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 429
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 60, 170

Conread position: 10-498
Cow position: chr6:65896769-65896265 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 21

Conread position: 10-607
Cow position: chr6:16624024-16624607 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 52

Conread position: 11-592
Cow position: chr6:49391-48794 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 105

Conread position: 11-592
Cow position: chr6:1275812-1275210 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 18

Conread position: 11-592
Cow position: chr6:5947600-5946998 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 198

Conread position: 11-592
Cow position: chr6:44018646-44018050 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 131

Conread position: 21-384
Cow position: chr6:3685084-3685449 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 142

Conread position: 21-592
Cow position: chr6:15138976-15138388 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 116

Conread position: 24-592
Cow position: chr6:33465167-33465740 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 33

Conread position: 30-600
Cow position: chr6:21833439-21832871 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 51

Conread position: 38-592
Cow position: chr6:50570414-50570980 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 126

Conread position: 43-599
Cow position: chr6:51149153-51149727 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 163

Conread position: 58-605
Cow position: chr6:6158897-6159449 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 190

Conread position: 101-607
Cow position: chr6:3573055-3573563 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 54

Conread position: 105-592
Cow position: chr6:15278279-15277770 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 102

Conread position: 164-607
Cow position: chr6:39956407-39956856 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 42

Conread position: 166-567
Cow position: chr6:69144736-69145146 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 79

Conread position: 194-599
Cow position: chr6:10235575-10235986 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 12

Conread position: 233-384
Cow position: chr6:32677526-32677372 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 61, 126

Show alignments to all cow chromosomes.