Cow genome map

Conread name: rebs31c_k1.y1

Conread position: 1-384
Cow position: chrX:21751654-21751264 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 126

Conread position: 1-543
Cow position: chrX:34093823-34093260 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 209

Conread position: 1-592
Cow position: chrX:2381517-2382082 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 78

Conread position: 1-592
Cow position: chrX:39696781-39697384 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 45

Conread position: 1-600
Cow position: chrX:6579951-6580558 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 206

Conread position: 1-600
Cow position: chrX:24412037-24412651 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 46

Conread position: 1-607
Cow position: chrX:35939020-35938410 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 209

Conread position: 2-607
Cow position: chrX:36838724-36839345 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 211

Conread position: 4-592
Cow position: chrX:23454041-23453437 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 133

Conread position: 10-384
Cow position: chrX:29792044-29791687 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 261
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 129, 148

Conread position: 10-607
Cow position: chrX:22126749-22126151 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 150

Conread position: 11-590
Cow position: chrX:9094666-9095256 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 153

Conread position: 11-592
Cow position: chrX:13407262-13406671 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 195

Conread position: 21-501
Cow position: chrX:7095529-7096022 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 143

Conread position: 21-561
Cow position: chrX:30436934-30437492 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 186

Conread position: 21-588
Cow position: chrX:21492195-21492781 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 186

Conread position: 21-592
Cow position: chrX:31727512-31728092 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 119

Conread position: 21-592
Cow position: chrX:34007813-34008401 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 125

Conread position: 21-606
Cow position: chrX:6248145-6247575 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 117

Conread position: 24-384
Cow position: chrX:28625591-28625233 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 101

Conread position: 25-387
Cow position: chrX:3142869-3143234 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 86

Conread position: 25-484
Cow position: chrX:21268040-21267562 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 5

Conread position: 26-356
Cow position: chrX:17665764-17665430 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 181

Conread position: 32-549
Cow position: chrX:21000245-21000785 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 65

Conread position: 38-384
Cow position: chrX:20364068-20363749 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 239
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 111, 57

Conread position: 43-592
Cow position: chrX:20741578-20741013 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 164

Conread position: 44-565
Cow position: chrX:13416376-13415838 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 20

Conread position: 52-592
Cow position: chrX:4906933-4906381 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 154

Conread position: 58-607
Cow position: chrX:3407265-3406706 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 34

Conread position: 72-592
Cow position: chrX:26443159-26442630 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 113

Conread position: 78-592
Cow position: chrX:27591930-27591405 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 86

Conread position: 82-383
Cow position: chrX:22590753-22590446 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 127

Conread position: 118-379
Cow position: chrX:21628252-21627993 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 197
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 30, 46

Conread position: 142-592
Cow position: chrX:9067124-9067583 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 62

Conread position: 197-384
Cow position: chrX:47394750-47394560 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 29, 9

Conread position: 233-514
Cow position: chrX:16736831-16736537 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 30, 45

Conread position: 236-600
Cow position: chrX:30164987-30164607 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 123

Conread position: 250-607
Cow position: chrX:19877075-19877461 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 39

Show alignments to all cow chromosomes.