Cow genome map
Conread name: | rebs31c_k1.y1 |
Conread position: | 1-384 |
Cow position: | chrX:21751654-21751264 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 126 |
Conread position: | 1-543 |
Cow position: | chrX:34093823-34093260 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 209 |
Conread position: | 1-592 |
Cow position: | chrX:2381517-2382082 (view UCSC Genome Browser custom track) |
Alignm length: | 600 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 78 |
Conread position: | 1-592 |
Cow position: | chrX:39696781-39697384 (view UCSC Genome Browser custom track) |
Alignm length: | 614 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 45 |
Conread position: | 1-600 |
Cow position: | chrX:6579951-6580558 (view UCSC Genome Browser custom track) |
Alignm length: | 613 |
Alignm identity: | 446 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 206 |
Conread position: | 1-600 |
Cow position: | chrX:24412037-24412651 (view UCSC Genome Browser custom track) |
Alignm length: | 623 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 46 |
Conread position: | 1-607 |
Cow position: | chrX:35939020-35938410 (view UCSC Genome Browser custom track) |
Alignm length: | 621 |
Alignm identity: | 458 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 209 |
Conread position: | 2-607 |
Cow position: | chrX:36838724-36839345 (view UCSC Genome Browser custom track) |
Alignm length: | 635 |
Alignm identity: | 455 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 211 |
Conread position: | 4-592 |
Cow position: | chrX:23454041-23453437 (view UCSC Genome Browser custom track) |
Alignm length: | 609 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 133 |
Conread position: | 10-384 |
Cow position: | chrX:29792044-29791687 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 261 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 129, 148 |
Conread position: | 10-607 |
Cow position: | chrX:22126749-22126151 (view UCSC Genome Browser custom track) |
Alignm length: | 618 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 150 |
Conread position: | 11-590 |
Cow position: | chrX:9094666-9095256 (view UCSC Genome Browser custom track) |
Alignm length: | 600 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 153 |
Conread position: | 11-592 |
Cow position: | chrX:13407262-13406671 (view UCSC Genome Browser custom track) |
Alignm length: | 599 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 195 |
Conread position: | 21-501 |
Cow position: | chrX:7095529-7096022 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 143 |
Conread position: | 21-561 |
Cow position: | chrX:30436934-30437492 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 186 |
Conread position: | 21-588 |
Cow position: | chrX:21492195-21492781 (view UCSC Genome Browser custom track) |
Alignm length: | 588 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 186 |
Conread position: | 21-592 |
Cow position: | chrX:31727512-31728092 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 197, 119 |
Conread position: | 21-592 |
Cow position: | chrX:34007813-34008401 (view UCSC Genome Browser custom track) |
Alignm length: | 591 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 125 |
Conread position: | 21-606 |
Cow position: | chrX:6248145-6247575 (view UCSC Genome Browser custom track) |
Alignm length: | 590 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 204, 117 |
Conread position: | 24-384 |
Cow position: | chrX:28625591-28625233 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 197, 101 |
Conread position: | 25-387 |
Cow position: | chrX:3142869-3143234 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 86 |
Conread position: | 25-484 |
Cow position: | chrX:21268040-21267562 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 5 |
Conread position: | 26-356 |
Cow position: | chrX:17665764-17665430 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 181 |
Conread position: | 32-549 |
Cow position: | chrX:21000245-21000785 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 65 |
Conread position: | 38-384 |
Cow position: | chrX:20364068-20363749 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 239 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 111, 57 |
Conread position: | 43-592 |
Cow position: | chrX:20741578-20741013 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 164 |
Conread position: | 44-565 |
Cow position: | chrX:13416376-13415838 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 20 |
Conread position: | 52-592 |
Cow position: | chrX:4906933-4906381 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 154 |
Conread position: | 58-607 |
Cow position: | chrX:3407265-3406706 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 34 |
Conread position: | 72-592 |
Cow position: | chrX:26443159-26442630 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 113 |
Conread position: | 78-592 |
Cow position: | chrX:27591930-27591405 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 86 |
Conread position: | 82-383 |
Cow position: | chrX:22590753-22590446 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 127 |
Conread position: | 118-379 |
Cow position: | chrX:21628252-21627993 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 197 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 30, 46 |
Conread position: | 142-592 |
Cow position: | chrX:9067124-9067583 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 62 |
Conread position: | 197-384 |
Cow position: | chrX:47394750-47394560 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 138 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 29, 9 |
Conread position: | 233-514 |
Cow position: | chrX:16736831-16736537 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 208 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 30, 45 |
Conread position: | 236-600 |
Cow position: | chrX:30164987-30164607 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 123 |
Conread position: | 250-607 |
Cow position: | chrX:19877075-19877461 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 39 |
Show alignments to all cow chromosomes.