Cow genome map
| Conread name: | rebs34c_a9.y1 |
| Conread position: | 2-301 |
| Cow position: | chr14:434099-434399 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 296, 0 |
| Conread position: | 2-312 |
| Cow position: | chr14:447962-448272 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-353 |
| Cow position: | chr14:3080557-3080206 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-358 |
| Cow position: | chr14:25895403-25895759 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-381 |
| Cow position: | chr14:680260-680639 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-381 |
| Cow position: | chr14:3061032-3060653 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-381 |
| Cow position: | chr14:3080221-3079842 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 188, 181 |
| Conread position: | 2-388 |
| Cow position: | chr14:3127649-3127263 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-388 |
| Cow position: | chr14:25895571-25895957 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-424 |
| Cow position: | chr14:447710-448132 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 89, 106 |
| Conread position: | 2-425 |
| Cow position: | chr14:3061284-3060861 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 342, 355 |
| Conread position: | 2-455 |
| Cow position: | chr14:25895151-25895604 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 278 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 388, 394 |
| Conread position: | 2-468 |
| Cow position: | chr14:3080473-3080007 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 400, 381 |
| Conread position: | 16-370 |
| Cow position: | chr14:3061690-3061336 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-424 |
| Cow position: | chr14:3080627-3080219 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 250 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 386, 367 |
| Conread position: | 18-424 |
| Cow position: | chr14:3061436-3061030 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 91, 97 |
| Conread position: | 19-380 |
| Cow position: | chr14:447559-447920 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-392 |
| Cow position: | chr14:680445-680819 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 371, 0 |
| Conread position: | 23-431 |
| Cow position: | chr14:3061770-3061359 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 10, 103 |
| Conread position: | 29-358 |
| Cow position: | chr14:25895346-25895675 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 215, 208 |
| Conread position: | 29-424 |
| Cow position: | chr14:3061341-3060946 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 379, 354 |
| Conread position: | 30-388 |
| Cow position: | chr14:680624-680982 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 30-424 |
| Cow position: | chr14:433959-434353 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 30-424 |
| Cow position: | chr14:3061172-3060778 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 245 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 232, 241 |
| Conread position: | 36-313 |
| Cow position: | chr14:3127783-3127506 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 36-381 |
| Cow position: | chr14:3080103-3079758 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 70, 65 |
| Conread position: | 36-388 |
| Cow position: | chr14:434049-434401 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-225 |
| Cow position: | chr14:3155649-3155837 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-305 |
| Cow position: | chr14:3155565-3155833 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-358 |
| Cow position: | chr14:3155481-3155802 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-362 |
| Cow position: | chr14:3128034-3127709 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-369 |
| Cow position: | chr14:447913-448245 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-381 |
| Cow position: | chr14:3127866-3127522 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-388 |
| Cow position: | chr14:680547-680898 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 232 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-424 |
| Cow position: | chr14:447829-448216 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 239, 244 |
| Conread position: | 37-424 |
| Cow position: | chr14:3061585-3061198 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 90, 83 |
| Conread position: | 37-424 |
| Cow position: | chr14:25895270-25895657 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 291, 284 |
| Conread position: | 37-425 |
| Cow position: | chr14:680715-681103 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 38-305 |
| Cow position: | chr14:3079933-3079666 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 39-368 |
| Cow position: | chr14:25895104-25895433 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 39-424 |
| Cow position: | chr14:680381-680766 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 71, 76 |
| Conread position: | 40-305 |
| Cow position: | chr14:680970-681235 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 63, 59 |
| Conread position: | 40-381 |
| Cow position: | chr14:3080267-3079926 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 40-424 |
| Cow position: | chr14:3080687-3080303 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 362, 343 |
| Conread position: | 40-463 |
| Cow position: | chr14:3061078-3060655 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 42-369 |
| Cow position: | chr14:680804-681131 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 42-381 |
| Cow position: | chr14:25895695-25896034 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 42-424 |
| Cow position: | chr14:3156059-3156441 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 359, 339 |
| Conread position: | 48-354 |
| Cow position: | chr14:663404-663098 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 48-408 |
| Cow position: | chr14:447672-448030 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 314, 329 |
| Conread position: | 48-424 |
| Cow position: | chr14:3155408-3155784 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 361, 335 |
| Conread position: | 49-388 |
| Cow position: | chr14:3080762-3080423 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 51-386 |
| Cow position: | chr14:3128104-3127770 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 332, 0 |
| Conread position: | 66-424 |
| Cow position: | chr14:680240-680598 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 324, 329 |
| Conread position: | 72-424 |
| Cow position: | chr14:3080823-3080471 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 327, 311 |
| Conread position: | 86-372 |
| Cow position: | chr14:3061452-3061166 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 107, 114 |
| Conread position: | 103-424 |
| Cow position: | chr14:447559-447880 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 287, 292 |
| Conread position: | 114-388 |
| Cow position: | chr14:3079941-3079667 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 125-424 |
| Cow position: | chr14:3127610-3127311 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 274, 258 |
| Conread position: | 134-381 |
| Cow position: | chr14:3156235-3156482 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-424 |
| Cow position: | chr14:433827-434101 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 216, 212 |
| Conread position: | 159-388 |
| Cow position: | chr14:3128164-3127935 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.