Cow genome map
| Conread name: | rebs34c_a9.y1 |
| Conread position: | 2-261 |
| Cow position: | chr25:33529217-33529476 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 85, 79 |
| Conread position: | 2-296 |
| Cow position: | chr25:25653063-25653357 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-301 |
| Cow position: | chr25:3636275-3635976 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-323 |
| Cow position: | chr25:4657346-4657024 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 20 |
| Conread position: | 2-350 |
| Cow position: | chr25:33506783-33507131 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 234 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 41, 32 |
| Conread position: | 2-369 |
| Cow position: | chr25:4657430-4657063 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 110, 97 |
| Conread position: | 2-369 |
| Cow position: | chr25:25652391-25652758 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-370 |
| Cow position: | chr25:25652811-25653179 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 243 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 20, 12 |
| Conread position: | 2-375 |
| Cow position: | chr25:34473710-34474080 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 102 |
| Conread position: | 2-381 |
| Cow position: | chr25:33157354-33156975 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 92, 112 |
| Conread position: | 2-381 |
| Cow position: | chr25:33298598-33298977 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-381 |
| Cow position: | chr25:33298682-33299061 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-424 |
| Cow position: | chr25:3636443-3636021 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 388, 393 |
| Conread position: | 2-424 |
| Cow position: | chr25:3663966-3664388 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 188, 179 |
| Conread position: | 2-424 |
| Cow position: | chr25:25652643-25653065 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 269 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 388, 393 |
| Conread position: | 2-455 |
| Cow position: | chr25:25652475-25652928 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 286 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 434, 422 |
| Conread position: | 2-459 |
| Cow position: | chr25:25652223-25652680 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-212 |
| Cow position: | chr25:3676209-3676405 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-330 |
| Cow position: | chr25:25652993-25653307 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 92, 99 |
| Conread position: | 16-369 |
| Cow position: | chr25:3676041-3676394 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 75 |
| Conread position: | 16-459 |
| Cow position: | chr25:34473556-34473996 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 274 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 111, 107 |
| Conread position: | 18-345 |
| Cow position: | chr25:33529149-33529476 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 269, 274 |
| Conread position: | 18-417 |
| Cow position: | chr25:33530196-33530595 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 67 |
| Conread position: | 18-418 |
| Cow position: | chr25:3636511-3636111 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-424 |
| Cow position: | chr25:25652323-25652729 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 258 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-424 |
| Cow position: | chr25:33530280-33530686 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 63 |
| Conread position: | 18-463 |
| Cow position: | chr25:33530364-33530809 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 82 |
| Conread position: | 19-310 |
| Cow position: | chr25:3676128-3676418 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 150, 168 |
| Conread position: | 19-358 |
| Cow position: | chr25:24385196-24384857 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-342 |
| Cow position: | chr25:24385027-24384705 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 279, 286 |
| Conread position: | 30-417 |
| Cow position: | chr25:24385269-24384882 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 84, 79 |
| Conread position: | 30-426 |
| Cow position: | chr25:24385353-24384957 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 68, 77 |
| Conread position: | 35-456 |
| Cow position: | chr25:3675976-3676397 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 336, 356 |
| Conread position: | 36-446 |
| Cow position: | chr25:24385095-24384684 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 269 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 336, 343 |
| Conread position: | 37-315 |
| Cow position: | chr25:33157235-33156957 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 245, 239 |
| Conread position: | 40-275 |
| Cow position: | chr25:34733936-34733701 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 40-381 |
| Cow position: | chr25:33157400-33157059 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 40-425 |
| Cow position: | chr25:3664172-3664557 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 40-455 |
| Cow position: | chr25:3664088-3664503 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 66, 61 |
| Conread position: | 41-320 |
| Cow position: | chr25:22941303-22941024 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 50, 62 |
| Conread position: | 41-348 |
| Cow position: | chr25:33530135-33530442 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 42-328 |
| Cow position: | chr25:33298806-33299092 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 42-424 |
| Cow position: | chr25:25652767-25653149 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 250 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 64, 58 |
| Conread position: | 42-424 |
| Cow position: | chr25:25652935-25653317 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 46-424 |
| Cow position: | chr25:3663926-3664304 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 351, 337 |
| Conread position: | 50-369 |
| Cow position: | chr25:25652187-25652506 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 54-424 |
| Cow position: | chr25:3636559-3636189 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 49, 27 |
| Conread position: | 56-297 |
| Cow position: | chr25:24398649-24398408 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 134, 127 |
| Conread position: | 56-424 |
| Cow position: | chr25:33529103-33529471 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 63-356 |
| Cow position: | chr25:24385404-24385111 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 43, 38 |
| Conread position: | 65-341 |
| Cow position: | chr25:3637079-3636800 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 57, 119 |
| Conread position: | 65-393 |
| Cow position: | chr25:33530495-33530822 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 317, 0 |
| Conread position: | 65-444 |
| Cow position: | chr25:33506762-33507141 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 56 |
| Conread position: | 66-424 |
| Cow position: | chr25:33529029-33529387 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 324, 329 |
| Conread position: | 67-425 |
| Cow position: | chr25:3675925-3676282 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 48, 27 |
| Conread position: | 72-388 |
| Cow position: | chr25:34733988-34733672 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-358 |
| Cow position: | chr25:3636276-3636003 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-381 |
| Cow position: | chr25:3664301-3664597 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 275, 280 |
| Conread position: | 102-381 |
| Cow position: | chr25:4657414-4657135 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 97, 88 |
| Conread position: | 105-417 |
| Cow position: | chr25:33530115-33530427 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 163, 154 |
| Conread position: | 112-424 |
| Cow position: | chr25:33506722-33507037 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 11, 270 |
| Conread position: | 113-396 |
| Cow position: | chr25:33127948-33128231 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 128-358 |
| Cow position: | chr25:25652181-25652411 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 133-381 |
| Cow position: | chr25:34763493-34763741 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 134-388 |
| Cow position: | chr25:34763161-34763415 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 135-381 |
| Cow position: | chr25:33127802-33128048 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 135-445 |
| Cow position: | chr25:36844536-36844235 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 257, 180 |
| Conread position: | 140-382 |
| Cow position: | chr25:24398649-24398407 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-386 |
| Cow position: | chr25:22235919-22236163 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 237, 231 |
| Conread position: | 150-412 |
| Cow position: | chr25:4657450-4657190 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 133, 124 |
| Conread position: | 198-424 |
| Cow position: | chr25:33157410-33157184 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 160, 147 |
Show alignments to all cow chromosomes.