Cow genome map
| Conread name: | rebs34c_a9.y1 |
| Conread position: | 2-298 |
| Cow position: | chr4:65350497-65350793 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 101, 89 |
| Conread position: | 2-305 |
| Cow position: | chr4:65494732-65494429 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 89, 100 |
| Conread position: | 2-310 |
| Cow position: | chr4:65702759-65702452 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 114, 108 |
| Conread position: | 2-345 |
| Cow position: | chr4:65349996-65350339 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-358 |
| Cow position: | chr4:65350416-65350769 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 125, 70 |
| Conread position: | 2-369 |
| Cow position: | chr4:65261517-65261150 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 108, 113 |
| Conread position: | 2-377 |
| Cow position: | chr4:65121736-65122112 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 100 |
| Conread position: | 2-381 |
| Cow position: | chr4:65120998-65121386 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 258 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 2-443 |
| Cow position: | chr4:65261601-65261160 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 388, 393 |
| Conread position: | 2-443 |
| Cow position: | chr4:65494906-65494459 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 291 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 54, 113 |
| Conread position: | 2-443 |
| Cow position: | chr4:65703464-65703026 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 283 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 125, 121 |
| Conread position: | 2-454 |
| Cow position: | chr4:65350164-65350613 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 102, 93 |
| Conread position: | 3-540 |
| Cow position: | chr4:65121653-65122190 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-296 |
| Cow position: | chr4:65157901-65158176 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 73, 28 |
| Conread position: | 18-350 |
| Cow position: | chr4:65703532-65703200 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-358 |
| Cow position: | chr4:65702827-65702487 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 185, 191 |
| Conread position: | 18-381 |
| Cow position: | chr4:65494800-65494437 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-424 |
| Cow position: | chr4:65350348-65350751 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 249 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 86, 73 |
| Conread position: | 20-459 |
| Cow position: | chr4:65121586-65122025 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 23-424 |
| Cow position: | chr4:65349765-65350166 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 246 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 175, 169 |
| Conread position: | 29-424 |
| Cow position: | chr4:65349855-65350250 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 32-424 |
| Cow position: | chr4:65702899-65702505 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 74 |
| Conread position: | 36-447 |
| Cow position: | chr4:65350114-65350522 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 263 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 139, 146 |
| Conread position: | 36-463 |
| Cow position: | chr4:65703598-65703171 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 395, 388 |
| Conread position: | 42-455 |
| Cow position: | chr4:65494950-65494531 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 90, 359 |
| Conread position: | 44-451 |
| Cow position: | chr4:65349954-65350361 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 249 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 78, 82 |
| Conread position: | 48-392 |
| Cow position: | chr4:65146417-65146761 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 49, 59 |
| Conread position: | 51-425 |
| Cow position: | chr4:65703667-65703293 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 251 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 53, 40 |
| Conread position: | 64-451 |
| Cow position: | chr4:65121546-65121933 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 333, 319 |
| Conread position: | 72-447 |
| Cow position: | chr4:65495004-65494623 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 151, 329 |
| Conread position: | 89-395 |
| Cow position: | chr4:65146373-65146680 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 28, 42 |
| Conread position: | 102-369 |
| Cow position: | chr4:65157901-65158165 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 109-301 |
| Cow position: | chr4:65146899-65147093 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 27, 7 |
| Conread position: | 109-424 |
| Cow position: | chr4:65702904-65702589 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 27, 15 |
| Conread position: | 117-445 |
| Cow position: | chr4:65261654-65261326 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 278, 266 |
| Conread position: | 128-463 |
| Cow position: | chr4:65703674-65703339 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 71, 65 |
| Conread position: | 134-388 |
| Cow position: | chr4:65157837-65158100 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 200-369 |
| Cow position: | chr4:65146905-65147077 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 216-459 |
| Cow position: | chr4:65146417-65146660 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 174, 179 |
| Conread position: | 241-388 |
| Cow position: | chr4:65402063-65402210 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.