Cow genome map
| Conread name: | reye1630b_k12r1.y1 |
| Conread position: | 174-339 |
| Cow position: | chr10:37668128-37668295 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 179-333 |
| Cow position: | chr10:10750229-10750384 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 180-309 |
| Cow position: | chr10:5151367-5151237 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 69, 121 |
| Conread position: | 180-314 |
| Cow position: | chr10:30523042-30523177 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 180-333 |
| Cow position: | chr10:8449522-8449367 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 180-334 |
| Cow position: | chr10:39228168-39228013 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 180-334 |
| Cow position: | chr10:46327711-46327556 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 14, 7 |
| Conread position: | 180-335 |
| Cow position: | chr10:31027623-31027779 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 79, 101 |
| Conread position: | 180-339 |
| Cow position: | chr10:22527881-22528041 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 45, 57 |
| Conread position: | 180-339 |
| Cow position: | chr10:24756432-24756279 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 180-339 |
| Cow position: | chr10:24781209-24781050 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 180-339 |
| Cow position: | chr10:28395281-28395437 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 75, 102 |
| Conread position: | 180-339 |
| Cow position: | chr10:30352870-30352710 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 75, 11 |
| Conread position: | 180-339 |
| Cow position: | chr10:30360541-30360382 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 76, 134 |
| Conread position: | 180-339 |
| Cow position: | chr10:35778880-35779039 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 180-339 |
| Cow position: | chr10:37415810-37415650 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 28 |
| Conread position: | 180-339 |
| Cow position: | chr10:38014387-38014228 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 79, 101 |
| Conread position: | 180-339 |
| Cow position: | chr10:40163913-40164071 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 68, 132 |
| Conread position: | 180-339 |
| Cow position: | chr10:52695706-52695866 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 180-339 |
| Cow position: | chr10:53674846-53674687 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 80, 111 |
| Conread position: | 180-339 |
| Cow position: | chr10:54504625-54504468 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 180-341 |
| Cow position: | chr10:15462512-15462350 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 180-341 |
| Cow position: | chr10:37529245-37529405 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 81, 33 |
| Conread position: | 181-334 |
| Cow position: | chr10:56828298-56828450 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 56 |
| Conread position: | 181-339 |
| Cow position: | chr10:33215823-33215663 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 183-341 |
| Cow position: | chr10:31362196-31362347 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 188-313 |
| Cow position: | chr10:6199032-6198907 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 67, 123 |
| Conread position: | 188-314 |
| Cow position: | chr10:23056065-23056191 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 188-315 |
| Cow position: | chr10:23506475-23506604 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 188-327 |
| Cow position: | chr10:21422144-21422285 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 188-327 |
| Cow position: | chr10:59159083-59159222 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 188-337 |
| Cow position: | chr10:17022551-17022699 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 188-339 |
| Cow position: | chr10:7366771-7366923 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 73, 39 |
| Conread position: | 188-339 |
| Cow position: | chr10:8923292-8923140 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 188-339 |
| Cow position: | chr10:15817778-15817930 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 188-339 |
| Cow position: | chr10:20095773-20095620 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 188-339 |
| Cow position: | chr10:38725670-38725520 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 66, 36 |
| Conread position: | 188-339 |
| Cow position: | chr10:46195798-46195645 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 133, 96 |
| Conread position: | 188-339 |
| Cow position: | chr10:47773743-47773592 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 188-339 |
| Cow position: | chr10:51944376-51944221 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 188-339 |
| Cow position: | chr10:69997788-69997940 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 191-339 |
| Cow position: | chr10:2613378-2613229 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 191-339 |
| Cow position: | chr10:22520152-22520301 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 191-339 |
| Cow position: | chr10:25260265-25260116 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 65, 91 |
| Conread position: | 191-339 |
| Cow position: | chr10:33665852-33665701 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 191-339 |
| Cow position: | chr10:45371066-45370917 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 192-339 |
| Cow position: | chr10:6543734-6543585 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 194-339 |
| Cow position: | chr10:37913182-37913325 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 197-339 |
| Cow position: | chr10:14947265-14947124 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 89 |
| Conread position: | 197-339 |
| Cow position: | chr10:21657430-21657286 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 212-333 |
| Cow position: | chr10:34655122-34655244 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 214-335 |
| Cow position: | chr10:24971624-24971746 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 221-338 |
| Cow position: | chr10:29090712-29090828 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 228-341 |
| Cow position: | chr10:35791905-35791793 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 71 |
| Conread position: | 234-339 |
| Cow position: | chr10:35026446-35026341 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 23, 17 |
Show alignments to all cow chromosomes.