Cow genome map
| Conread name: | reye1630b_k12r1.y1 |
| Conread position: | 177-339 |
| Cow position: | chr21:18041735-18041898 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 180-329 |
| Cow position: | chr21:17856652-17856502 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 180-329 |
| Cow position: | chr21:29214052-29214195 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 180-334 |
| Cow position: | chr21:22014298-22014142 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 23, 34 |
| Conread position: | 180-336 |
| Cow position: | chr21:37480063-37479912 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 79, 115 |
| Conread position: | 180-338 |
| Cow position: | chr21:641695-641537 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 180-339 |
| Cow position: | chr21:297862-297703 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 84, 131 |
| Conread position: | 180-339 |
| Cow position: | chr21:724777-724936 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 76, 11 |
| Conread position: | 180-339 |
| Cow position: | chr21:11644858-11645020 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 180-339 |
| Cow position: | chr21:16187699-16187858 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 80, 113 |
| Conread position: | 180-339 |
| Cow position: | chr21:23192401-23192564 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 180-339 |
| Cow position: | chr21:29069218-29069379 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 180-339 |
| Cow position: | chr21:38121209-38121051 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 119 |
| Conread position: | 180-341 |
| Cow position: | chr21:47465010-47465174 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 35, 28 |
| Conread position: | 187-326 |
| Cow position: | chr21:27229690-27229831 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 187-339 |
| Cow position: | chr21:4280571-4280722 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 70, 56 |
| Conread position: | 188-334 |
| Cow position: | chr21:5392435-5392585 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 188-334 |
| Cow position: | chr21:8349431-8349283 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 188-337 |
| Cow position: | chr21:20192997-20192849 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 62 |
| Conread position: | 188-338 |
| Cow position: | chr21:34654173-34654028 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 188-339 |
| Cow position: | chr21:20260219-20260371 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 188-339 |
| Cow position: | chr21:22861102-22860949 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 188-339 |
| Cow position: | chr21:29485082-29484929 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 188-339 |
| Cow position: | chr21:30222445-30222294 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 71, 123 |
| Conread position: | 188-339 |
| Cow position: | chr21:33982707-33982856 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 188-339 |
| Cow position: | chr21:44214227-44214074 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 37, 48 |
| Conread position: | 188-339 |
| Cow position: | chr21:44515364-44515213 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 141, 124 |
| Conread position: | 188-339 |
| Cow position: | chr21:45262710-45262862 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 70, 101 |
| Conread position: | 191-315 |
| Cow position: | chr21:8426543-8426421 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 191-339 |
| Cow position: | chr21:46264267-46264122 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 192-341 |
| Cow position: | chr21:13488623-13488470 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
Show alignments to all cow chromosomes.