Cow genome map
| Conread name: | reye1630b_k12r1.y1 |
| Conread position: | 176-339 |
| Cow position: | chr4:66112029-66112194 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 180-314 |
| Cow position: | chr4:48409232-48409366 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 37 |
| Conread position: | 180-327 |
| Cow position: | chr4:20139478-20139626 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 180-333 |
| Cow position: | chr4:63096037-63096189 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 75, 100 |
| Conread position: | 180-334 |
| Cow position: | chr4:38157051-38157207 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 180-336 |
| Cow position: | chr4:3687959-3687805 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 180-337 |
| Cow position: | chr4:47730895-47730738 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 76, 132 |
| Conread position: | 180-338 |
| Cow position: | chr4:37915299-37915458 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 76, 23 |
| Conread position: | 180-339 |
| Cow position: | chr4:20299312-20299152 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 76, 89 |
| Conread position: | 180-339 |
| Cow position: | chr4:21391775-21391934 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 79, 37 |
| Conread position: | 180-339 |
| Cow position: | chr4:25537584-25537424 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 180-339 |
| Cow position: | chr4:31136792-31136630 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 80, 25 |
| Conread position: | 180-339 |
| Cow position: | chr4:38935396-38935235 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 180-339 |
| Cow position: | chr4:38952590-38952431 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 180-339 |
| Cow position: | chr4:48486031-48485883 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 80, 102 |
| Conread position: | 180-341 |
| Cow position: | chr4:10379147-10378985 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 180-341 |
| Cow position: | chr4:23847014-23847171 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 85, 32 |
| Conread position: | 180-341 |
| Cow position: | chr4:51728116-51727953 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 181-339 |
| Cow position: | chr4:61897499-61897657 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 125, 82 |
| Conread position: | 181-341 |
| Cow position: | chr4:16799150-16799311 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 182-338 |
| Cow position: | chr4:22215616-22215772 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 99 |
| Conread position: | 182-339 |
| Cow position: | chr4:52831982-52832139 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 76, 23 |
| Conread position: | 188-326 |
| Cow position: | chr4:11194215-11194076 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 188-334 |
| Cow position: | chr4:12903850-12903702 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 188-338 |
| Cow position: | chr4:42921828-42921971 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 188-339 |
| Cow position: | chr4:275492-275342 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 188-339 |
| Cow position: | chr4:11332126-11331971 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 188-339 |
| Cow position: | chr4:21874204-21874053 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 65, 112 |
| Conread position: | 188-339 |
| Cow position: | chr4:54455313-54455464 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 191-334 |
| Cow position: | chr4:51899032-51898891 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 72, 33 |
| Conread position: | 191-338 |
| Cow position: | chr4:17111847-17111997 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 192-334 |
| Cow position: | chr4:19463521-19463379 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 193-339 |
| Cow position: | chr4:36290648-36290507 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 211-339 |
| Cow position: | chr4:35982002-35981872 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 214-337 |
| Cow position: | chr4:1419227-1419103 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
Show alignments to all cow chromosomes.