Cow genome map
| Conread name: | reye1630b_k12r1.y1 |
| Conread position: | 174-339 |
| Cow position: | chr7:27079720-27079555 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 8, 72 |
| Conread position: | 176-327 |
| Cow position: | chr7:35300327-35300479 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 6, 62 |
| Conread position: | 177-339 |
| Cow position: | chr7:6042063-6041905 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 7, 38 |
| Conread position: | 177-339 |
| Cow position: | chr7:36278388-36278224 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 121 |
| Conread position: | 180-326 |
| Cow position: | chr7:32894162-32894308 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 180-334 |
| Cow position: | chr7:31170862-31171018 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 180-335 |
| Cow position: | chr7:8658601-8658446 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 89, 98 |
| Conread position: | 180-338 |
| Cow position: | chr7:28544263-28544105 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 180-338 |
| Cow position: | chr7:48714940-48714781 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 180-339 |
| Cow position: | chr7:8102507-8102350 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 180-339 |
| Cow position: | chr7:8272748-8272588 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 180-339 |
| Cow position: | chr7:11714340-11714498 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 180-339 |
| Cow position: | chr7:20534958-20534804 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 81, 99 |
| Conread position: | 180-339 |
| Cow position: | chr7:23646697-23646535 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 49, 75 |
| Conread position: | 180-339 |
| Cow position: | chr7:26631726-26631885 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 15, 29 |
| Conread position: | 180-339 |
| Cow position: | chr7:39415996-39415837 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 80, 122 |
| Conread position: | 180-339 |
| Cow position: | chr7:42593192-42593351 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 180-339 |
| Cow position: | chr7:42637057-42636909 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 180-339 |
| Cow position: | chr7:49751215-49751055 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 181-339 |
| Cow position: | chr7:60483340-60483498 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-314 |
| Cow position: | chr7:20168629-20168501 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 188-297 |
| Cow position: | chr7:33393387-33393276 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 188-314 |
| Cow position: | chr7:11958358-11958482 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 188-314 |
| Cow position: | chr7:56886431-56886556 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 188-335 |
| Cow position: | chr7:5199470-5199618 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 188-335 |
| Cow position: | chr7:18288189-18288335 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 75, 15 |
| Conread position: | 188-338 |
| Cow position: | chr7:3773188-3773339 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 22 |
| Conread position: | 188-339 |
| Cow position: | chr7:10227-10073 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 72, 28 |
| Conread position: | 188-339 |
| Cow position: | chr7:14353710-14353861 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 188-339 |
| Cow position: | chr7:28917169-28917016 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 47, 84 |
| Conread position: | 188-339 |
| Cow position: | chr7:32915193-32915038 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 15, 69 |
| Conread position: | 188-339 |
| Cow position: | chr7:35274999-35275152 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 188-339 |
| Cow position: | chr7:37361958-37361809 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 188-339 |
| Cow position: | chr7:50066038-50066184 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 71, 94 |
| Conread position: | 188-339 |
| Cow position: | chr7:53053325-53053473 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 78, 131 |
| Conread position: | 188-339 |
| Cow position: | chr7:60732557-60732711 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 188-341 |
| Cow position: | chr7:28584325-28584173 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 190-309 |
| Cow position: | chr7:47698089-47697968 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 191-339 |
| Cow position: | chr7:23456746-23456895 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 191-341 |
| Cow position: | chr7:49106126-49106275 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 67, 12 |
| Conread position: | 194-339 |
| Cow position: | chr7:32819891-32819744 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 212-339 |
| Cow position: | chr7:23679537-23679663 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 46, 34 |
| Conread position: | 215-339 |
| Cow position: | chr7:51319852-51319727 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
Show alignments to all cow chromosomes.