Cow genome map
Conread name: | rfcc33b_d9.y1 |
Conread position: | 1-455 |
Cow position: | chr10:23935300-23935766 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 31 |
Conread position: | 1-531 |
Cow position: | chr10:47772986-47773529 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 165 |
Conread position: | 1-539 |
Cow position: | chr10:46195046-46195595 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 234 |
Conread position: | 1-547 |
Cow position: | chr10:9798953-9798382 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 154 |
Conread position: | 1-547 |
Cow position: | chr10:34673156-34673710 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 206 |
Conread position: | 1-552 |
Cow position: | chr10:24222922-24222356 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 332 |
Conread position: | 1-558 |
Cow position: | chr10:51558965-51559539 (view UCSC Genome Browser custom track) |
Alignm length: | 582 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 333 |
Conread position: | 1-565 |
Cow position: | chr10:23877375-23876794 (view UCSC Genome Browser custom track) |
Alignm length: | 588 |
Alignm identity: | 440 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 331 |
Conread position: | 1-565 |
Cow position: | chr10:33933759-33933180 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 329 |
Conread position: | 1-573 |
Cow position: | chr10:6253244-6252647 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 450 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 70 |
Conread position: | 1-574 |
Cow position: | chr10:32282579-32283170 (view UCSC Genome Browser custom track) |
Alignm length: | 599 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 334 |
Conread position: | 1-574 |
Cow position: | chr10:52277979-52278565 (view UCSC Genome Browser custom track) |
Alignm length: | 597 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 116 |
Conread position: | 2-468 |
Cow position: | chr10:50038580-50039060 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 115 |
Conread position: | 2-547 |
Cow position: | chr10:9287318-9287878 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 226 |
Conread position: | 2-559 |
Cow position: | chr10:29815833-29816412 (view UCSC Genome Browser custom track) |
Alignm length: | 588 |
Alignm identity: | 444 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 339 |
Conread position: | 2-563 |
Cow position: | chr10:15867503-15868062 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 87 |
Conread position: | 3-468 |
Cow position: | chr10:24743531-24744012 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 332 |
Conread position: | 3-565 |
Cow position: | chr10:33665093-33665669 (view UCSC Genome Browser custom track) |
Alignm length: | 587 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 333 |
Conread position: | 3-572 |
Cow position: | chr10:38724922-38725498 (view UCSC Genome Browser custom track) |
Alignm length: | 600 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 50 |
Conread position: | 3-574 |
Cow position: | chr10:25341841-25342430 (view UCSC Genome Browser custom track) |
Alignm length: | 599 |
Alignm identity: | 446 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 224 |
Conread position: | 4-552 |
Cow position: | chr10:50110642-50110088 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 86 |
Conread position: | 4-565 |
Cow position: | chr10:42347169-42346596 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 242 |
Conread position: | 5-558 |
Cow position: | chr10:63955061-63955619 (view UCSC Genome Browser custom track) |
Alignm length: | 578 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 192 |
Conread position: | 28-552 |
Cow position: | chr10:58599348-58598808 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 14 |
Conread position: | 34-463 |
Cow position: | chr10:30106780-30106340 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 8 |
Conread position: | 35-539 |
Cow position: | chr10:24308610-24308099 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 297 |
Conread position: | 37-574 |
Cow position: | chr10:10573138-10573691 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 131 |
Conread position: | 41-574 |
Cow position: | chr10:10047976-10048519 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 51 |
Conread position: | 42-558 |
Cow position: | chr10:30745693-30746223 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 24 |
Conread position: | 42-562 |
Cow position: | chr10:12393282-12392775 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 39 |
Conread position: | 45-554 |
Cow position: | chr10:58607399-58607924 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 126 |
Conread position: | 48-558 |
Cow position: | chr10:33215110-33215619 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 121 |
Conread position: | 52-465 |
Cow position: | chr10:24751694-24752120 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 13 |
Conread position: | 53-552 |
Cow position: | chr10:23328693-23328181 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 282 |
Conread position: | 60-572 |
Cow position: | chr10:46801690-46801168 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 112 |
Conread position: | 66-552 |
Cow position: | chr10:10134297-10134794 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 110 |
Conread position: | 66-574 |
Cow position: | chr10:6489198-6489704 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 260 |
Conread position: | 91-552 |
Cow position: | chr10:48270436-48269958 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 241 |
Conread position: | 131-436 |
Cow position: | chr10:55011458-55011776 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 226 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 85, 206 |
Conread position: | 131-555 |
Cow position: | chr10:58066750-58066315 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 198 |
Conread position: | 131-573 |
Cow position: | chr10:30359916-30360367 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 112 |
Conread position: | 133-438 |
Cow position: | chr10:34299874-34300184 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 235 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 83, 112 |
Conread position: | 137-490 |
Cow position: | chr10:9580058-9579699 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 263 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 18, 52 |
Conread position: | 138-435 |
Cow position: | chr10:32833720-32834040 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 230 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 138-437 |
Cow position: | chr10:53357029-53357334 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 230 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 78, 16 |
Conread position: | 138-563 |
Cow position: | chr10:50608947-50609365 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 33 |
Conread position: | 146-572 |
Cow position: | chr10:62285950-62286387 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 35 |
Conread position: | 149-554 |
Cow position: | chr10:37311733-37311319 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 183 |
Conread position: | 151-574 |
Cow position: | chr10:25224-25667 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 177 |
Conread position: | 158-451 |
Cow position: | chr10:30370783-30370483 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 217 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 58, 70 |
Conread position: | 160-455 |
Cow position: | chr10:55098306-55097992 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 221 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 56, 182 |
Conread position: | 162-498 |
Cow position: | chr10:24755851-24756202 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 254 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 54, 92 |
Conread position: | 185-574 |
Cow position: | chr10:13050849-13050455 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 143 |
Conread position: | 189-558 |
Cow position: | chr10:44680963-44681340 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 138 |
Conread position: | 199-552 |
Cow position: | chr10:39386910-39387276 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 229 |
Conread position: | 203-524 |
Cow position: | chr10:22429501-22429173 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 196 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 59, 120 |
Conread position: | 210-552 |
Cow position: | chr10:48462874-48462522 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 123 |
Conread position: | 214-468 |
Cow position: | chr10:60355561-60355802 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 179 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 214-535 |
Cow position: | chr10:29339924-29339598 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 231 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 35, 230 |
Conread position: | 214-555 |
Cow position: | chr10:53336931-53336584 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 249 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 48, 110 |
Conread position: | 214-571 |
Cow position: | chr10:6529672-6530038 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 111 |
Conread position: | 214-574 |
Cow position: | chr10:13311199-13311570 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 126 |
Conread position: | 214-574 |
Cow position: | chr10:56094706-56095066 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 38 |
Conread position: | 221-552 |
Cow position: | chr10:29322361-29322697 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 105 |
Conread position: | 225-558 |
Cow position: | chr10:11247460-11247795 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 246 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 37, 100 |
Conread position: | 259-544 |
Cow position: | chr10:14189271-14189004 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 59 |
Conread position: | 259-574 |
Cow position: | chr10:32928292-32928605 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 216 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 86, 197 |
Conread position: | 260-465 |
Cow position: | chr10:45476458-45476656 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 149 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 260-466 |
Cow position: | chr10:46150105-46150306 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 154 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 83, 49 |
Conread position: | 260-550 |
Cow position: | chr10:46172438-46172160 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 200 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 81, 51 |
Conread position: | 260-552 |
Cow position: | chr10:65345928-65345635 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 66 |
Conread position: | 260-554 |
Cow position: | chr10:26577080-26577368 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 58 |
Conread position: | 260-563 |
Cow position: | chr10:5113118-5113413 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 53 |
Conread position: | 260-565 |
Cow position: | chr10:22567906-22567611 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 260-565 |
Cow position: | chr10:35828920-35828621 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 260-565 |
Cow position: | chr10:49935269-49935581 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 213 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 165, 49 |
Conread position: | 260-574 |
Cow position: | chr10:22509652-22509346 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 227 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 255, 48 |
Conread position: | 260-574 |
Cow position: | chr10:24744651-24744965 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 53 |
Conread position: | 261-563 |
Cow position: | chr10:50067990-50067694 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 211 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 261-572 |
Cow position: | chr10:9082844-9083135 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 221 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 261-574 |
Cow position: | chr10:19104650-19104338 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 225, 48 |
Conread position: | 264-445 |
Cow position: | chr10:19093751-19093930 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 133 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 264-542 |
Cow position: | chr10:24972061-24971793 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 204 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 47, 55 |
Conread position: | 264-560 |
Cow position: | chr10:8403726-8404033 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 219 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 151, 0 |
Conread position: | 264-574 |
Cow position: | chr10:28569598-28569905 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 44 |
Conread position: | 268-524 |
Cow position: | chr10:24292787-24292531 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 188 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 39, 142 |
Conread position: | 297-554 |
Cow position: | chr10:24547820-24548076 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 0 |
Show alignments to all cow chromosomes.