Cow genome map

Conread name: rfcc33b_d9.y1

Conread position: 1-500
Cow position:
Alignm length: 529
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 126

Conread position: 1-517
Cow position:
Alignm length: 550
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 16

Conread position: 1-552
Cow position:
Alignm length: 576
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 160

Conread position: 1-552
Cow position:
Alignm length: 578
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 331

Conread position: 1-552
Cow position:
Alignm length: 575
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 330

Conread position: 1-557
Cow position:
Alignm length: 580
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 196

Conread position: 1-558
Cow position:
Alignm length: 581
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 19

Conread position: 1-563
Cow position:
Alignm length: 586
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 65

Conread position: 1-565
Cow position:
Alignm length: 588
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 164

Conread position: 1-574
Cow position:
Alignm length: 605
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 357

Conread position: 1-574
Cow position:
Alignm length: 593
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 328

Conread position: 2-435
Cow position:
Alignm length: 458
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 335

Conread position: 2-444
Cow position:
Alignm length: 467
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 89

Conread position: 2-513
Cow position:
Alignm length: 535
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 332

Conread position: 2-547
Cow position:
Alignm length: 574
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 183

Conread position: 3-540
Cow position:
Alignm length: 570
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 42

Conread position: 3-554
Cow position:
Alignm length: 587
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 336

Conread position: 3-565
Cow position:
Alignm length: 572
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 228

Conread position: 4-552
Cow position:
Alignm length: 572
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 335

Conread position: 4-555
Cow position:
Alignm length: 571
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 179

Conread position: 8-552
Cow position:
Alignm length: 568
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 324

Conread position: 12-573
Cow position:
Alignm length: 591
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 324

Conread position: 16-563
Cow position:
Alignm length: 567
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 20

Conread position: 20-552
Cow position:
Alignm length: 556
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 315

Conread position: 22-574
Cow position:
Alignm length: 577
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 22

Conread position: 47-547
Cow position:
Alignm length: 530
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 293

Conread position: 74-552
Cow position:
Alignm length: 498
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 258

Conread position: 100-552
Cow position:
Alignm length: 461
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 84

Conread position: 131-531
Cow position:
Alignm length: 417
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 194

Conread position: 138-552
Cow position:
Alignm length: 439
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 83

Conread position: 138-574
Cow position:
Alignm length: 453
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 194

Conread position: 138-574
Cow position:
Alignm length: 458
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 191

Conread position: 138-574
Cow position:
Alignm length: 454
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 22

Conread position: 145-513
Cow position:
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 180

Conread position: 149-552
Cow position:
Alignm length: 425
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 178

Conread position: 149-554
Cow position:
Alignm length: 430
Alignm identity: 296
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 67, 11

Conread position: 150-563
Cow position:
Alignm length: 433
Alignm identity: 299
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 18, 183

Conread position: 152-550
Cow position:
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 51

Conread position: 155-547
Cow position:
Alignm length: 414
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 173

Conread position: 169-444
Cow position:
Alignm length: 293
Alignm identity: 210
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 47, 9

Conread position: 169-569
Cow position:
Alignm length: 423
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 45

Conread position: 169-572
Cow position:
Alignm length: 422
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 155

Conread position: 181-574
Cow position:
Alignm length: 410
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 146

Conread position: 185-438
Cow position:
Alignm length: 270
Alignm identity: 193
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 14

Conread position: 185-494
Cow position:
Alignm length: 326
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 144

Conread position: 214-455
Cow position:
Alignm length: 256
Alignm identity: 182
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 108

Conread position: 214-554
Cow position:
Alignm length: 349
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 240

Conread position: 260-438
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 260-444
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 260-574
Cow position:
Alignm length: 317
Alignm identity: 227
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 149, 48

Conread position: 264-523
Cow position:
Alignm length: 260
Alignm identity: 189
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 49, 0

Conread position: 264-543
Cow position:
Alignm length: 280
Alignm identity: 209
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 42, 0

Conread position: 264-554
Cow position:
Alignm length: 291
Alignm identity: 183
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 239, 0

Conread position: 264-562
Cow position:
Alignm length: 300
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 47

Conread position: 271-552
Cow position:
Alignm length: 282
Alignm identity: 201
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 291-563
Cow position:
Alignm length: 275
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 22

Show alignments to all cow chromosomes.