Cow genome map


           Conread name:
           rfcc33b_d9.y1
        

               Conread position:
               1-543
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 331
               

               Conread position:
               1-565
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 61
               

               Conread position:
               2-550
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 341
               

               Conread position:
               2-574
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 183
               

               Conread position:
               2-574
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 329
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 17
               

               Conread position:
               3-558
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 62
               

               Conread position:
               3-558
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 17
               

               Conread position:
               3-574
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 348
               

               Conread position:
               4-559
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 22
               

               Conread position:
               6-574
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 35
               

               Conread position:
               11-562
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 86
               

               Conread position:
               11-574
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 33
               

               Conread position:
               12-550
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 80
               

               Conread position:
               43-554
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 22
               

               Conread position:
               49-404
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 273
               

               Conread position:
               50-554
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 69
               

               Conread position:
               62-558
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 274
               

               Conread position:
               65-563
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 117
               

               Conread position:
               80-555
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 109
               

               Conread position:
               86-484
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 246
               

               Conread position:
               93-420
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               243
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               123, 41
               

               Conread position:
               126-515
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 36
               

               Conread position:
               131-574
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 68
               

               Conread position:
               138-484
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 188
               

               Conread position:
               138-552
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 52
               

               Conread position:
               138-558
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 75
               

               Conread position:
               138-574
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 86
               

               Conread position:
               139-572
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 105
               

               Conread position:
               145-574
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               304
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               101, 57
               

               Conread position:
               150-552
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 262
               

               Conread position:
               154-572
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               293
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               100, 62
               

               Conread position:
               169-552
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 160
               

               Conread position:
               184-552
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 145
               

               Conread position:
               186-548
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 141
               

               Conread position:
               188-574
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 137
               

               Conread position:
               189-574
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 15
               

               Conread position:
               192-574
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               22, 132
               

               Conread position:
               195-574
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               287
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               7, 138
               

               Conread position:
               203-546
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 7
               

               Conread position:
               214-558
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 111
               

               Conread position:
               215-465
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               197
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               44, 110
               

               Conread position:
               241-558
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 29
               

               Conread position:
               260-554
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               47, 66
               

               Conread position:
               260-554
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 43
               

               Conread position:
               260-563
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 46
               

               Conread position:
               260-573
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 65
               

               Conread position:
               260-574
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               264-574
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 53
               

               Conread position:
               277-558
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               202
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               36, 0
               
Show alignments to all cow chromosomes.