Cow genome map

Conread name: rfcc33b_d9.y1

Conread position: 1-558
Cow position:
Alignm length: 583
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 175

Conread position: 1-558
Cow position:
Alignm length: 581
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 43

Conread position: 1-558
Cow position:
Alignm length: 579
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 119

Conread position: 1-563
Cow position:
Alignm length: 589
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 242

Conread position: 2-474
Cow position:
Alignm length: 484
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 27

Conread position: 2-485
Cow position:
Alignm length: 508
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 331

Conread position: 2-540
Cow position:
Alignm length: 563
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 63

Conread position: 2-544
Cow position:
Alignm length: 550
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 24

Conread position: 2-550
Cow position:
Alignm length: 574
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 88

Conread position: 2-562
Cow position:
Alignm length: 585
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 332

Conread position: 2-563
Cow position:
Alignm length: 586
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 173

Conread position: 3-492
Cow position:
Alignm length: 502
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 203

Conread position: 3-544
Cow position:
Alignm length: 567
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 338

Conread position: 3-554
Cow position:
Alignm length: 571
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 114

Conread position: 3-558
Cow position:
Alignm length: 581
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 41

Conread position: 3-565
Cow position:
Alignm length: 594
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 186

Conread position: 31-554
Cow position:
Alignm length: 551
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 34

Conread position: 40-532
Cow position:
Alignm length: 521
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 300

Conread position: 44-447
Cow position:
Alignm length: 425
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 160

Conread position: 44-463
Cow position:
Alignm length: 435
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 284

Conread position: 59-558
Cow position:
Alignm length: 523
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 119

Conread position: 61-552
Cow position:
Alignm length: 510
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 76

Conread position: 69-574
Cow position:
Alignm length: 526
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 104

Conread position: 82-574
Cow position:
Alignm length: 512
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 91

Conread position: 85-552
Cow position:
Alignm length: 487
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 104

Conread position: 89-522
Cow position:
Alignm length: 457
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 90

Conread position: 89-544
Cow position:
Alignm length: 479
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 246

Conread position: 98-444
Cow position:
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 234

Conread position: 151-554
Cow position:
Alignm length: 430
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 153-552
Cow position:
Alignm length: 417
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 176

Conread position: 154-469
Cow position:
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 170

Conread position: 159-570
Cow position:
Alignm length: 429
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 45

Conread position: 169-532
Cow position:
Alignm length: 388
Alignm identity: 267
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 46, 260

Conread position: 174-552
Cow position:
Alignm length: 396
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 153

Conread position: 180-552
Cow position:
Alignm length: 399
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 142

Conread position: 183-501
Cow position:
Alignm length: 334
Alignm identity: 223
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 26, 137

Conread position: 201-555
Cow position:
Alignm length: 373
Alignm identity: 263
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 15, 129

Conread position: 203-451
Cow position:
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 214-453
Cow position:
Alignm length: 256
Alignm identity: 188
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 48, 109

Conread position: 214-552
Cow position:
Alignm length: 353
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 115

Conread position: 220-574
Cow position:
Alignm length: 368
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 32

Conread position: 257-555
Cow position:
Alignm length: 303
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 56

Conread position: 260-460
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 260-462
Cow position:
Alignm length: 210
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 260-532
Cow position:
Alignm length: 273
Alignm identity: 195
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 49, 0

Conread position: 260-547
Cow position:
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 260-552
Cow position:
Alignm length: 293
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-573
Cow position:
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 51

Conread position: 260-573
Cow position:
Alignm length: 318
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 53

Conread position: 260-574
Cow position:
Alignm length: 315
Alignm identity: 227
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 51, 0

Conread position: 264-511
Cow position:
Alignm length: 250
Alignm identity: 179
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 191, 45

Conread position: 264-547
Cow position:
Alignm length: 284
Alignm identity: 207
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 47, 0

Conread position: 266-574
Cow position:
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 50

Conread position: 269-547
Cow position:
Alignm length: 279
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 444-574
Cow position:
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.