Cow genome map

Conread name: rfcc33b_d9.y1

Conread position: 1-454
Cow position:
Alignm length: 478
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 334

Conread position: 1-544
Cow position:
Alignm length: 567
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 169

Conread position: 1-552
Cow position:
Alignm length: 575
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-558
Cow position:
Alignm length: 584
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 333

Conread position: 2-448
Cow position:
Alignm length: 465
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 77

Conread position: 2-547
Cow position:
Alignm length: 564
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 329

Conread position: 2-547
Cow position:
Alignm length: 570
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 109

Conread position: 3-353
Cow position:
Alignm length: 370
Alignm identity: 253
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 128, 17

Conread position: 4-558
Cow position:
Alignm length: 581
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 32

Conread position: 22-455
Cow position:
Alignm length: 461
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 23

Conread position: 38-552
Cow position:
Alignm length: 538
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 298

Conread position: 39-520
Cow position:
Alignm length: 509
Alignm identity: 323
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 96, 27

Conread position: 42-574
Cow position:
Alignm length: 555
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 293

Conread position: 131-574
Cow position:
Alignm length: 464
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 216

Conread position: 135-562
Cow position:
Alignm length: 456
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 208

Conread position: 138-442
Cow position:
Alignm length: 325
Alignm identity: 233
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 23, 65

Conread position: 138-451
Cow position:
Alignm length: 324
Alignm identity: 211
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 45, 23

Conread position: 139-574
Cow position:
Alignm length: 453
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 186

Conread position: 144-551
Cow position:
Alignm length: 422
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 15

Conread position: 154-552
Cow position:
Alignm length: 417
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 179

Conread position: 154-554
Cow position:
Alignm length: 417
Alignm identity: 264
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 215

Conread position: 165-547
Cow position:
Alignm length: 403
Alignm identity: 264
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 44, 158

Conread position: 172-552
Cow position:
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 155

Conread position: 181-550
Cow position:
Alignm length: 385
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 147

Conread position: 187-574
Cow position:
Alignm length: 405
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 135

Conread position: 199-550
Cow position:
Alignm length: 367
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 17

Conread position: 203-455
Cow position:
Alignm length: 266
Alignm identity: 184
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 40, 7

Conread position: 203-552
Cow position:
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 7

Conread position: 203-558
Cow position:
Alignm length: 356
Alignm identity: 238
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 7, 0

Conread position: 211-468
Cow position:
Alignm length: 272
Alignm identity: 187
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 111

Conread position: 213-563
Cow position:
Alignm length: 365
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 110

Conread position: 214-547
Cow position:
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 101

Conread position: 214-554
Cow position:
Alignm length: 361
Alignm identity: 242
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 48, 105

Conread position: 259-450
Cow position:
Alignm length: 194
Alignm identity: 132
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 52, 75

Conread position: 260-552
Cow position:
Alignm length: 295
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 53

Conread position: 260-552
Cow position:
Alignm length: 296
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 74, 51

Conread position: 260-557
Cow position:
Alignm length: 300
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 73, 53

Conread position: 260-563
Cow position:
Alignm length: 317
Alignm identity: 226
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 175, 51

Conread position: 260-563
Cow position:
Alignm length: 305
Alignm identity: 211
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 147, 49

Conread position: 260-574
Cow position:
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 49

Conread position: 260-574
Cow position:
Alignm length: 315
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 261-438
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 264-444
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 264-558
Cow position:
Alignm length: 296
Alignm identity: 189
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 256, 111

Conread position: 264-573
Cow position:
Alignm length: 317
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 49

Conread position: 275-558
Cow position:
Alignm length: 288
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 31

Conread position: 276-550
Cow position:
Alignm length: 275
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 0

Show alignments to all cow chromosomes.