Cow genome map
| Conread name: | rfcc33b_d9.y1 |
| Conread position: | 1-454 |
| Cow position: | chr23:26941255-26941726 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 334 |
| Conread position: | 1-544 |
| Cow position: | chr23:7311148-7311706 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 169 |
| Conread position: | 1-552 |
| Cow position: | chr23:31584788-31585356 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 331 |
| Conread position: | 1-558 |
| Cow position: | chr23:28306331-28306905 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 333 |
| Conread position: | 2-448 |
| Cow position: | chr23:17404097-17404548 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 77 |
| Conread position: | 2-547 |
| Cow position: | chr23:1321909-1321357 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 329 |
| Conread position: | 2-547 |
| Cow position: | chr23:6720996-6720441 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 109 |
| Conread position: | 3-353 |
| Cow position: | chr23:16057179-16057547 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 253 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 128, 17 |
| Conread position: | 4-558 |
| Cow position: | chr23:31276983-31277548 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 32 |
| Conread position: | 22-455 |
| Cow position: | chr23:9393389-9392930 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 38-552 |
| Cow position: | chr23:10852366-10852893 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 298 |
| Conread position: | 39-520 |
| Cow position: | chr23:41538159-41538662 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 323 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 96, 27 |
| Conread position: | 42-574 |
| Cow position: | chr23:13511052-13511596 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 293 |
| Conread position: | 131-574 |
| Cow position: | chr23:1745094-1745548 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 216 |
| Conread position: | 135-562 |
| Cow position: | chr23:4608979-4608530 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 208 |
| Conread position: | 138-442 |
| Cow position: | chr23:23885058-23885378 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 233 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 23, 65 |
| Conread position: | 138-451 |
| Cow position: | chr23:39823094-39823409 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 45, 23 |
| Conread position: | 139-574 |
| Cow position: | chr23:3716793-3717239 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 186 |
| Conread position: | 144-551 |
| Cow position: | chr23:40371173-40370758 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 15 |
| Conread position: | 154-552 |
| Cow position: | chr23:20980280-20980687 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 179 |
| Conread position: | 154-554 |
| Cow position: | chr23:18108147-18108553 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 215 |
| Conread position: | 165-547 |
| Cow position: | chr23:20704300-20703903 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 264 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 44, 158 |
| Conread position: | 172-552 |
| Cow position: | chr23:3877515-3877125 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 155 |
| Conread position: | 181-550 |
| Cow position: | chr23:20001540-20001915 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 147 |
| Conread position: | 187-574 |
| Cow position: | chr23:9268056-9268453 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 135 |
| Conread position: | 199-550 |
| Cow position: | chr23:1670398-1670755 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 203-455 |
| Cow position: | chr23:9653033-9652770 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 40, 7 |
| Conread position: | 203-552 |
| Cow position: | chr23:1430314-1429952 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 7 |
| Conread position: | 203-558 |
| Cow position: | chr23:1289804-1290141 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 238 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 211-468 |
| Cow position: | chr23:6245441-6245176 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 10, 111 |
| Conread position: | 213-563 |
| Cow position: | chr23:18655381-18655739 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 110 |
| Conread position: | 214-547 |
| Cow position: | chr23:8910987-8911315 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 101 |
| Conread position: | 214-554 |
| Cow position: | chr23:39573798-39573448 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 48, 105 |
| Conread position: | 259-450 |
| Cow position: | chr23:27523723-27523532 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 52, 75 |
| Conread position: | 260-552 |
| Cow position: | chr23:11128789-11129076 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 53 |
| Conread position: | 260-552 |
| Cow position: | chr23:35926154-35926437 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 74, 51 |
| Conread position: | 260-557 |
| Cow position: | chr23:497049-496753 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 73, 53 |
| Conread position: | 260-563 |
| Cow position: | chr23:18797147-18796837 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 226 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 175, 51 |
| Conread position: | 260-563 |
| Cow position: | chr23:35937579-35937871 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 147, 49 |
| Conread position: | 260-574 |
| Cow position: | chr23:29441446-29441136 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 49 |
| Conread position: | 260-574 |
| Cow position: | chr23:39389820-39390128 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 261-438 |
| Cow position: | chr23:5420951-5420781 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 264-444 |
| Cow position: | chr23:36198806-36198979 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 264-558 |
| Cow position: | chr23:3745167-3745452 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 256, 111 |
| Conread position: | 264-573 |
| Cow position: | chr23:26986721-26986412 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 49 |
| Conread position: | 275-558 |
| Cow position: | chr23:4579467-4579186 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 31 |
| Conread position: | 276-550 |
| Cow position: | chr23:32309253-32309520 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 35, 0 |
Show alignments to all cow chromosomes.