Cow genome map

Conread name: rfcc33b_d9.y1

Conread position: 1-453
Cow position:
Alignm length: 475
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 196

Conread position: 1-484
Cow position:
Alignm length: 507
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-484
Cow position:
Alignm length: 507
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-544
Cow position:
Alignm length: 560
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 40

Conread position: 1-565
Cow position:
Alignm length: 588
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-565
Cow position:
Alignm length: 590
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 332

Conread position: 1-574
Cow position:
Alignm length: 598
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 63

Conread position: 2-444
Cow position:
Alignm length: 458
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 10

Conread position: 2-531
Cow position:
Alignm length: 569
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 15

Conread position: 2-574
Cow position:
Alignm length: 596
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 57

Conread position: 3-307
Cow position:
Alignm length: 324
Alignm identity: 221
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 19, 12

Conread position: 3-555
Cow position:
Alignm length: 572
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 147

Conread position: 3-563
Cow position:
Alignm length: 578
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 118

Conread position: 3-574
Cow position:
Alignm length: 600
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 185

Conread position: 4-441
Cow position:
Alignm length: 462
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 335

Conread position: 4-574
Cow position:
Alignm length: 602
Alignm identity: 389
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 118, 169

Conread position: 15-552
Cow position:
Alignm length: 563
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 191

Conread position: 17-558
Cow position:
Alignm length: 562
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 13

Conread position: 42-435
Cow position:
Alignm length: 411
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 286

Conread position: 81-574
Cow position:
Alignm length: 519
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 126

Conread position: 92-574
Cow position:
Alignm length: 507
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 237

Conread position: 101-550
Cow position:
Alignm length: 461
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 220

Conread position: 125-532
Cow position:
Alignm length: 429
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 126

Conread position: 131-465
Cow position:
Alignm length: 359
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 17

Conread position: 131-547
Cow position:
Alignm length: 434
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 40

Conread position: 131-558
Cow position:
Alignm length: 444
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 197

Conread position: 131-558
Cow position:
Alignm length: 442
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 81

Conread position: 131-574
Cow position:
Alignm length: 455
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 52

Conread position: 138-552
Cow position:
Alignm length: 431
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 187

Conread position: 142-554
Cow position:
Alignm length: 431
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 154-532
Cow position:
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 60

Conread position: 154-554
Cow position:
Alignm length: 424
Alignm identity: 275
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 16, 100

Conread position: 160-551
Cow position:
Alignm length: 396
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 154

Conread position: 160-572
Cow position:
Alignm length: 430
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 170

Conread position: 184-552
Cow position:
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 50

Conread position: 185-574
Cow position:
Alignm length: 409
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 143

Conread position: 192-544
Cow position:
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 41

Conread position: 214-490
Cow position:
Alignm length: 292
Alignm identity: 210
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 48, 125

Conread position: 214-574
Cow position:
Alignm length: 376
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 113

Conread position: 215-574
Cow position:
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 107

Conread position: 218-433
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 102

Conread position: 236-565
Cow position:
Alignm length: 340
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 82

Conread position: 248-563
Cow position:
Alignm length: 318
Alignm identity: 217
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 78, 15

Conread position: 260-430
Cow position:
Alignm length: 171
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 260-450
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 260-451
Cow position:
Alignm length: 193
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 53

Conread position: 260-452
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 260-455
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 260-551
Cow position:
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 260-552
Cow position:
Alignm length: 293
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-558
Cow position:
Alignm length: 300
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 53

Conread position: 260-558
Cow position:
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 56

Conread position: 260-560
Cow position:
Alignm length: 303
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 51

Conread position: 260-573
Cow position:
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 53

Conread position: 260-574
Cow position:
Alignm length: 318
Alignm identity: 209
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 228, 53

Conread position: 264-455
Cow position:
Alignm length: 192
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 266-558
Cow position:
Alignm length: 293
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 275-574
Cow position:
Alignm length: 301
Alignm identity: 207
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 60, 33

Conread position: 281-558
Cow position:
Alignm length: 279
Alignm identity: 195
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 58, 44

Show alignments to all cow chromosomes.