Cow genome map

Conread name: rfcc33b_d9.y1

Conread position: 1-408
Cow position:
Alignm length: 418
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 64

Conread position: 1-455
Cow position:
Alignm length: 478
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 80

Conread position: 1-552
Cow position:
Alignm length: 575
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 331

Conread position: 1-554
Cow position:
Alignm length: 578
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 211

Conread position: 1-555
Cow position:
Alignm length: 577
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 20

Conread position: 1-574
Cow position:
Alignm length: 590
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 27

Conread position: 1-574
Cow position:
Alignm length: 602
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 66

Conread position: 2-552
Cow position:
Alignm length: 573
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 222

Conread position: 2-554
Cow position:
Alignm length: 581
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 33

Conread position: 3-465
Cow position:
Alignm length: 488
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 329

Conread position: 9-552
Cow position:
Alignm length: 567
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 323

Conread position: 35-574
Cow position:
Alignm length: 555
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 290

Conread position: 42-554
Cow position:
Alignm length: 528
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 96

Conread position: 53-303
Cow position:
Alignm length: 262
Alignm identity: 186
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 23, 6

Conread position: 67-552
Cow position:
Alignm length: 509
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 265

Conread position: 86-465
Cow position:
Alignm length: 392
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 42

Conread position: 118-451
Cow position:
Alignm length: 354
Alignm identity: 253
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 98, 7

Conread position: 131-463
Cow position:
Alignm length: 349
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 194

Conread position: 131-552
Cow position:
Alignm length: 443
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 75

Conread position: 131-565
Cow position:
Alignm length: 451
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 194

Conread position: 150-552
Cow position:
Alignm length: 409
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 54

Conread position: 154-574
Cow position:
Alignm length: 444
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 15

Conread position: 157-552
Cow position:
Alignm length: 422
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 166

Conread position: 160-574
Cow position:
Alignm length: 434
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 21

Conread position: 182-526
Cow position:
Alignm length: 363
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 31

Conread position: 187-562
Cow position:
Alignm length: 396
Alignm identity: 255
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 151

Conread position: 192-547
Cow position:
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 55

Conread position: 192-552
Cow position:
Alignm length: 365
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 47

Conread position: 194-528
Cow position:
Alignm length: 355
Alignm identity: 250
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 22, 143

Conread position: 194-550
Cow position:
Alignm length: 373
Alignm identity: 265
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 22, 135

Conread position: 203-468
Cow position:
Alignm length: 280
Alignm identity: 205
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 59, 7

Conread position: 214-554
Cow position:
Alignm length: 357
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 107

Conread position: 218-573
Cow position:
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 115

Conread position: 260-403
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 260-550
Cow position:
Alignm length: 292
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 217

Conread position: 260-552
Cow position:
Alignm length: 293
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 260-558
Cow position:
Alignm length: 301
Alignm identity: 214
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 264, 51

Conread position: 260-558
Cow position:
Alignm length: 299
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 260-558
Cow position:
Alignm length: 299
Alignm identity: 211
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 51, 0

Conread position: 260-565
Cow position:
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 51

Conread position: 260-574
Cow position:
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 260-574
Cow position:
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 261-555
Cow position:
Alignm length: 296
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 52

Conread position: 261-558
Cow position:
Alignm length: 298
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 264-542
Cow position:
Alignm length: 281
Alignm identity: 183
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 69

Conread position: 271-574
Cow position:
Alignm length: 307
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 42

Conread position: 275-433
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 275-541
Cow position:
Alignm length: 267
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 275-542
Cow position:
Alignm length: 268
Alignm identity: 195
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 36, 0

Show alignments to all cow chromosomes.