Cow genome map

Conread name: rfcc33b_d9.y1

Conread position: 1-451
Cow position:
Alignm length: 475
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 197

Conread position: 1-544
Cow position:
Alignm length: 562
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 44

Conread position: 1-552
Cow position:
Alignm length: 580
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 334

Conread position: 1-565
Cow position:
Alignm length: 588
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 99

Conread position: 1-565
Cow position:
Alignm length: 588
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 329

Conread position: 1-569
Cow position:
Alignm length: 605
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 250

Conread position: 1-574
Cow position:
Alignm length: 598
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 333

Conread position: 3-514
Cow position:
Alignm length: 516
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 82

Conread position: 3-554
Cow position:
Alignm length: 600
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 15

Conread position: 3-558
Cow position:
Alignm length: 580
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 332

Conread position: 3-563
Cow position:
Alignm length: 600
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 337

Conread position: 8-560
Cow position:
Alignm length: 577
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 324

Conread position: 36-539
Cow position:
Alignm length: 527
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 140

Conread position: 44-574
Cow position:
Alignm length: 554
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 24

Conread position: 46-558
Cow position:
Alignm length: 527
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 145

Conread position: 52-552
Cow position:
Alignm length: 524
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 280

Conread position: 78-523
Cow position:
Alignm length: 471
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 257

Conread position: 131-558
Cow position:
Alignm length: 446
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 38

Conread position: 158-558
Cow position:
Alignm length: 417
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 7

Conread position: 160-555
Cow position:
Alignm length: 413
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 169

Conread position: 181-552
Cow position:
Alignm length: 389
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 146

Conread position: 204-552
Cow position:
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 121

Conread position: 215-465
Cow position:
Alignm length: 265
Alignm identity: 183
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 27

Conread position: 260-410
Cow position:
Alignm length: 152
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 260-438
Cow position:
Alignm length: 179
Alignm identity: 126
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 260-451
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 260-531
Cow position:
Alignm length: 280
Alignm identity: 196
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 98, 53

Conread position: 260-552
Cow position:
Alignm length: 293
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-552
Cow position:
Alignm length: 293
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-565
Cow position:
Alignm length: 306
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-574
Cow position:
Alignm length: 318
Alignm identity: 226
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 229, 51

Conread position: 260-574
Cow position:
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 53

Conread position: 261-552
Cow position:
Alignm length: 294
Alignm identity: 210
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 46, 65

Conread position: 264-539
Cow position:
Alignm length: 278
Alignm identity: 205
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 97, 49

Conread position: 264-573
Cow position:
Alignm length: 310
Alignm identity: 218
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 39, 0

Conread position: 266-574
Cow position:
Alignm length: 311
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 45

Conread position: 267-574
Cow position:
Alignm length: 309
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 46

Conread position: 269-558
Cow position:
Alignm length: 290
Alignm identity: 206
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 42, 0

Conread position: 281-491
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 133, 0

Show alignments to all cow chromosomes.