Cow genome map
| Conread name: | rfcc33b_d9.y1 |
| Conread position: | 1-451 |
| Cow position: | chr26:8810386-8810850 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 197 |
| Conread position: | 1-544 |
| Cow position: | chr26:31138420-31137876 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 44 |
| Conread position: | 1-552 |
| Cow position: | chr26:23600503-23599935 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 334 |
| Conread position: | 1-565 |
| Cow position: | chr26:3230998-3231578 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 99 |
| Conread position: | 1-565 |
| Cow position: | chr26:8738885-8738304 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 329 |
| Conread position: | 1-569 |
| Cow position: | chr26:18918795-18918197 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 250 |
| Conread position: | 1-574 |
| Cow position: | chr26:22831507-22830919 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 333 |
| Conread position: | 3-514 |
| Cow position: | chr26:12965334-12964838 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 82 |
| Conread position: | 3-554 |
| Cow position: | chr26:12126039-12125445 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 15 |
| Conread position: | 3-558 |
| Cow position: | chr26:17327702-17328271 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 332 |
| Conread position: | 3-563 |
| Cow position: | chr26:24239226-24239819 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 337 |
| Conread position: | 8-560 |
| Cow position: | chr26:14395940-14395370 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 324 |
| Conread position: | 36-539 |
| Cow position: | chr26:13706661-13706155 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 140 |
| Conread position: | 44-574 |
| Cow position: | chr26:2676678-2676138 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 24 |
| Conread position: | 46-558 |
| Cow position: | chr26:21351047-21351549 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 145 |
| Conread position: | 52-552 |
| Cow position: | chr26:30754197-30754714 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 280 |
| Conread position: | 78-523 |
| Cow position: | chr26:8034222-8034685 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 257 |
| Conread position: | 131-558 |
| Cow position: | chr26:1106831-1107269 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 38 |
| Conread position: | 158-558 |
| Cow position: | chr26:30807058-30806649 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 7 |
| Conread position: | 160-555 |
| Cow position: | chr26:16720373-16720778 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 169 |
| Conread position: | 181-552 |
| Cow position: | chr26:6714808-6714426 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 146 |
| Conread position: | 204-552 |
| Cow position: | chr26:8053296-8053654 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 121 |
| Conread position: | 215-465 |
| Cow position: | chr26:20130568-20130307 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 27 |
| Conread position: | 260-410 |
| Cow position: | chr26:17056990-17057141 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 260-438 |
| Cow position: | chr26:21242414-21242592 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 260-451 |
| Cow position: | chr26:26249074-26249258 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 260-531 |
| Cow position: | chr26:33012096-33011827 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 98, 53 |
| Conread position: | 260-552 |
| Cow position: | chr26:762354-762068 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 260-552 |
| Cow position: | chr26:14209231-14209517 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 260-565 |
| Cow position: | chr26:16210444-16210743 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 260-574 |
| Cow position: | chr26:3757361-3757669 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 229, 51 |
| Conread position: | 260-574 |
| Cow position: | chr26:6448034-6447728 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 53 |
| Conread position: | 261-552 |
| Cow position: | chr26:12238463-12238187 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 46, 65 |
| Conread position: | 264-539 |
| Cow position: | chr26:12145530-12145264 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 97, 49 |
| Conread position: | 264-573 |
| Cow position: | chr26:31781525-31781822 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 266-574 |
| Cow position: | chr26:30724798-30724494 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 45 |
| Conread position: | 267-574 |
| Cow position: | chr26:32380881-32381180 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 46 |
| Conread position: | 269-558 |
| Cow position: | chr26:32933312-32933595 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 281-491 |
| Cow position: | chr26:35448670-35448879 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 133, 0 |
Show alignments to all cow chromosomes.