Cow genome map

Conread name: rfcc33b_d9.y1

Conread position: 1-440
Cow position:
Alignm length: 464
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 214

Conread position: 1-455
Cow position:
Alignm length: 479
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 239

Conread position: 1-463
Cow position:
Alignm length: 489
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 106

Conread position: 1-466
Cow position:
Alignm length: 489
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 329

Conread position: 1-486
Cow position:
Alignm length: 509
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 43

Conread position: 1-552
Cow position:
Alignm length: 575
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-552
Cow position:
Alignm length: 575
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 91

Conread position: 1-558
Cow position:
Alignm length: 581
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 43

Conread position: 1-563
Cow position:
Alignm length: 590
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 69

Conread position: 1-566
Cow position:
Alignm length: 589
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 19

Conread position: 1-573
Cow position:
Alignm length: 611
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 159

Conread position: 2-563
Cow position:
Alignm length: 590
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 164

Conread position: 2-574
Cow position:
Alignm length: 592
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 122

Conread position: 3-552
Cow position:
Alignm length: 571
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 185

Conread position: 3-563
Cow position:
Alignm length: 580
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 132

Conread position: 4-508
Cow position:
Alignm length: 530
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 169

Conread position: 5-554
Cow position:
Alignm length: 570
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 197

Conread position: 32-435
Cow position:
Alignm length: 434
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 314

Conread position: 32-565
Cow position:
Alignm length: 558
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 300

Conread position: 36-574
Cow position:
Alignm length: 562
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 15

Conread position: 44-563
Cow position:
Alignm length: 544
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 31

Conread position: 49-411
Cow position:
Alignm length: 383
Alignm identity: 262
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 86, 47

Conread position: 56-574
Cow position:
Alignm length: 556
Alignm identity: 351
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 81, 116

Conread position: 57-465
Cow position:
Alignm length: 432
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 14

Conread position: 87-558
Cow position:
Alignm length: 505
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 57

Conread position: 101-441
Cow position:
Alignm length: 364
Alignm identity: 253
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 104, 44

Conread position: 131-486
Cow position:
Alignm length: 370
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 28

Conread position: 131-552
Cow position:
Alignm length: 438
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 198

Conread position: 133-552
Cow position:
Alignm length: 437
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 193

Conread position: 134-563
Cow position:
Alignm length: 431
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 65

Conread position: 138-532
Cow position:
Alignm length: 411
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 186

Conread position: 138-555
Cow position:
Alignm length: 438
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 196

Conread position: 142-539
Cow position:
Alignm length: 415
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 187

Conread position: 153-509
Cow position:
Alignm length: 377
Alignm identity: 240
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 188

Conread position: 154-437
Cow position:
Alignm length: 290
Alignm identity: 199
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 62, 88

Conread position: 157-548
Cow position:
Alignm length: 408
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 15

Conread position: 171-547
Cow position:
Alignm length: 384
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 215-574
Cow position:
Alignm length: 376
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 111

Conread position: 220-565
Cow position:
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 98

Conread position: 248-560
Cow position:
Alignm length: 317
Alignm identity: 224
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 13, 67

Conread position: 259-573
Cow position:
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 60

Conread position: 260-465
Cow position:
Alignm length: 206
Alignm identity: 143
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 260-558
Cow position:
Alignm length: 300
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 51

Conread position: 260-564
Cow position:
Alignm length: 305
Alignm identity: 208
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 260-566
Cow position:
Alignm length: 308
Alignm identity: 205
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 55

Conread position: 261-573
Cow position:
Alignm length: 315
Alignm identity: 219
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 216, 47

Conread position: 261-574
Cow position:
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 65

Conread position: 264-438
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 264-547
Cow position:
Alignm length: 284
Alignm identity: 203
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 44, 0

Conread position: 267-461
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 275-552
Cow position:
Alignm length: 292
Alignm identity: 219
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 36, 91

Conread position: 294-554
Cow position:
Alignm length: 261
Alignm identity: 178
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 138, 0

Show alignments to all cow chromosomes.