Cow genome map

Conread name: rfcc33b_d9.y1

Conread position: 1-314
Cow position:
Alignm length: 332
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 1-398
Cow position:
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 329

Conread position: 1-445
Cow position:
Alignm length: 471
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 337

Conread position: 1-453
Cow position:
Alignm length: 476
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 335

Conread position: 1-464
Cow position:
Alignm length: 487
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 164

Conread position: 1-484
Cow position:
Alignm length: 507
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-552
Cow position:
Alignm length: 575
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-552
Cow position:
Alignm length: 575
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 333

Conread position: 1-552
Cow position:
Alignm length: 586
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 129

Conread position: 1-552
Cow position:
Alignm length: 577
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 335

Conread position: 1-555
Cow position:
Alignm length: 581
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 41

Conread position: 1-555
Cow position:
Alignm length: 583
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 28

Conread position: 1-558
Cow position:
Alignm length: 583
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 335

Conread position: 1-558
Cow position:
Alignm length: 583
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 333

Conread position: 1-563
Cow position:
Alignm length: 589
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 124

Conread position: 1-563
Cow position:
Alignm length: 589
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 53

Conread position: 1-565
Cow position:
Alignm length: 588
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-568
Cow position:
Alignm length: 597
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 43

Conread position: 1-574
Cow position:
Alignm length: 611
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 512

Conread position: 1-574
Cow position:
Alignm length: 597
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 43

Conread position: 1-574
Cow position:
Alignm length: 597
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 106

Conread position: 1-574
Cow position:
Alignm length: 581
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 40

Conread position: 2-466
Cow position:
Alignm length: 494
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 34

Conread position: 2-554
Cow position:
Alignm length: 578
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 174

Conread position: 2-555
Cow position:
Alignm length: 576
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 331

Conread position: 2-572
Cow position:
Alignm length: 596
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 240

Conread position: 2-574
Cow position:
Alignm length: 612
Alignm identity: 397
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 127, 26

Conread position: 2-574
Cow position:
Alignm length: 596
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 173

Conread position: 3-433
Cow position:
Alignm length: 448
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 89

Conread position: 3-460
Cow position:
Alignm length: 483
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 3-538
Cow position:
Alignm length: 567
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 41

Conread position: 3-552
Cow position:
Alignm length: 572
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 25

Conread position: 3-552
Cow position:
Alignm length: 565
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 124

Conread position: 3-568
Cow position:
Alignm length: 577
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 23

Conread position: 7-463
Cow position:
Alignm length: 480
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 325

Conread position: 7-574
Cow position:
Alignm length: 589
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 41

Conread position: 30-450
Cow position:
Alignm length: 444
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 5

Conread position: 37-552
Cow position:
Alignm length: 539
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 295

Conread position: 43-552
Cow position:
Alignm length: 526
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 110

Conread position: 56-490
Cow position:
Alignm length: 461
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 281

Conread position: 72-552
Cow position:
Alignm length: 496
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 257

Conread position: 75-552
Cow position:
Alignm length: 501
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 257

Conread position: 79-552
Cow position:
Alignm length: 502
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 163

Conread position: 85-522
Cow position:
Alignm length: 455
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 311

Conread position: 97-574
Cow position:
Alignm length: 494
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 230

Conread position: 98-470
Cow position:
Alignm length: 392
Alignm identity: 273
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 89

Conread position: 114-562
Cow position:
Alignm length: 470
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 18

Conread position: 131-554
Cow position:
Alignm length: 426
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 34

Conread position: 131-574
Cow position:
Alignm length: 460
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 196

Conread position: 132-563
Cow position:
Alignm length: 446
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 22

Conread position: 135-552
Cow position:
Alignm length: 434
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 105

Conread position: 138-444
Cow position:
Alignm length: 324
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 74, 192

Conread position: 138-554
Cow position:
Alignm length: 432
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 21

Conread position: 138-562
Cow position:
Alignm length: 436
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 183

Conread position: 138-574
Cow position:
Alignm length: 457
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 192

Conread position: 139-539
Cow position:
Alignm length: 405
Alignm identity: 272
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 32, 7

Conread position: 141-574
Cow position:
Alignm length: 457
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 13

Conread position: 147-438
Cow position:
Alignm length: 307
Alignm identity: 215
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 115, 31

Conread position: 154-552
Cow position:
Alignm length: 418
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 9

Conread position: 154-574
Cow position:
Alignm length: 422
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 102

Conread position: 154-574
Cow position:
Alignm length: 437
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 175

Conread position: 155-574
Cow position:
Alignm length: 441
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 169

Conread position: 175-574
Cow position:
Alignm length: 414
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 144

Conread position: 178-563
Cow position:
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 148

Conread position: 181-510
Cow position:
Alignm length: 334
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 7

Conread position: 187-520
Cow position:
Alignm length: 347
Alignm identity: 231
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 125

Conread position: 192-574
Cow position:
Alignm length: 399
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 135

Conread position: 192-574
Cow position:
Alignm length: 411
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 135

Conread position: 203-565
Cow position:
Alignm length: 372
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 7

Conread position: 214-465
Cow position:
Alignm length: 259
Alignm identity: 177
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 46, 104

Conread position: 215-552
Cow position:
Alignm length: 352
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 108

Conread position: 217-515
Cow position:
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 106

Conread position: 220-574
Cow position:
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 97

Conread position: 221-574
Cow position:
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 118

Conread position: 227-555
Cow position:
Alignm length: 344
Alignm identity: 240
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 82, 7

Conread position: 260-449
Cow position:
Alignm length: 190
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 260-451
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 260-462
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 260-464
Cow position:
Alignm length: 208
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 193, 53

Conread position: 260-465
Cow position:
Alignm length: 209
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 62

Conread position: 260-465
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 260-487
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 260-538
Cow position:
Alignm length: 281
Alignm identity: 202
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 193, 53

Conread position: 260-547
Cow position:
Alignm length: 288
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 260-554
Cow position:
Alignm length: 298
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 51

Conread position: 260-558
Cow position:
Alignm length: 299
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 260-574
Cow position:
Alignm length: 315
Alignm identity: 223
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 51, 0

Conread position: 261-451
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 261-558
Cow position:
Alignm length: 299
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 125

Conread position: 261-563
Cow position:
Alignm length: 303
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 262-552
Cow position:
Alignm length: 293
Alignm identity: 197
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 174, 121

Conread position: 264-555
Cow position:
Alignm length: 296
Alignm identity: 200
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 44, 70

Conread position: 264-558
Cow position:
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 47

Conread position: 266-574
Cow position:
Alignm length: 309
Alignm identity: 211
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 268-547
Cow position:
Alignm length: 280
Alignm identity: 201
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 43, 0

Show alignments to all cow chromosomes.