Cow genome map

Conread name: rfcc33b_d9.y1

Conread position: 1-455
Cow position:
Alignm length: 464
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 16

Conread position: 1-460
Cow position:
Alignm length: 486
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 348

Conread position: 1-468
Cow position:
Alignm length: 475
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 264

Conread position: 1-552
Cow position:
Alignm length: 575
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-552
Cow position:
Alignm length: 575
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 333

Conread position: 1-555
Cow position:
Alignm length: 584
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 25

Conread position: 1-565
Cow position:
Alignm length: 589
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 332

Conread position: 1-565
Cow position:
Alignm length: 588
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 332

Conread position: 1-574
Cow position:
Alignm length: 599
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 19

Conread position: 1-574
Cow position:
Alignm length: 597
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 2-450
Cow position:
Alignm length: 473
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 333

Conread position: 2-535
Cow position:
Alignm length: 557
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 108

Conread position: 2-550
Cow position:
Alignm length: 575
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 15

Conread position: 2-552
Cow position:
Alignm length: 568
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 86

Conread position: 2-574
Cow position:
Alignm length: 605
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 226

Conread position: 3-463
Cow position:
Alignm length: 486
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 81

Conread position: 3-552
Cow position:
Alignm length: 575
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 15

Conread position: 3-574
Cow position:
Alignm length: 596
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 84

Conread position: 4-554
Cow position:
Alignm length: 575
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 183

Conread position: 5-552
Cow position:
Alignm length: 571
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 327

Conread position: 10-573
Cow position:
Alignm length: 583
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 88

Conread position: 20-539
Cow position:
Alignm length: 542
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 101

Conread position: 23-435
Cow position:
Alignm length: 437
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 79

Conread position: 32-480
Cow position:
Alignm length: 473
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 34

Conread position: 32-550
Cow position:
Alignm length: 544
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 98

Conread position: 35-552
Cow position:
Alignm length: 536
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 102

Conread position: 36-441
Cow position:
Alignm length: 426
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 140

Conread position: 51-472
Cow position:
Alignm length: 450
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 115

Conread position: 53-558
Cow position:
Alignm length: 542
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 284

Conread position: 131-558
Cow position:
Alignm length: 442
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 67

Conread position: 138-554
Cow position:
Alignm length: 444
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 147-574
Cow position:
Alignm length: 450
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 288

Conread position: 152-561
Cow position:
Alignm length: 425
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 33

Conread position: 155-523
Cow position:
Alignm length: 373
Alignm identity: 255
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 36, 16

Conread position: 166-558
Cow position:
Alignm length: 409
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 49

Conread position: 178-552
Cow position:
Alignm length: 391
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 147

Conread position: 183-563
Cow position:
Alignm length: 413
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 150

Conread position: 197-532
Cow position:
Alignm length: 352
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 132

Conread position: 203-522
Cow position:
Alignm length: 340
Alignm identity: 242
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 59, 7

Conread position: 203-574
Cow position:
Alignm length: 393
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 8

Conread position: 204-552
Cow position:
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 121

Conread position: 209-552
Cow position:
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 118

Conread position: 214-455
Cow position:
Alignm length: 256
Alignm identity: 181
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 48, 117

Conread position: 214-484
Cow position:
Alignm length: 285
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 109

Conread position: 222-511
Cow position:
Alignm length: 305
Alignm identity: 220
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 40, 100

Conread position: 259-552
Cow position:
Alignm length: 296
Alignm identity: 201
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 47, 75

Conread position: 260-465
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 260-479
Cow position:
Alignm length: 223
Alignm identity: 150
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 73, 88

Conread position: 260-547
Cow position:
Alignm length: 295
Alignm identity: 205
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 46, 58

Conread position: 260-550
Cow position:
Alignm length: 291
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 260-552
Cow position:
Alignm length: 293
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-552
Cow position:
Alignm length: 301
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 53

Conread position: 260-554
Cow position:
Alignm length: 301
Alignm identity: 209
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 178, 49

Conread position: 260-554
Cow position:
Alignm length: 301
Alignm identity: 209
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 178, 49

Conread position: 260-574
Cow position:
Alignm length: 321
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 51

Conread position: 260-574
Cow position:
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 53

Conread position: 260-574
Cow position:
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 59

Conread position: 260-574
Cow position:
Alignm length: 315
Alignm identity: 218
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 49, 0

Conread position: 261-468
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 261-548
Cow position:
Alignm length: 288
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 264-517
Cow position:
Alignm length: 254
Alignm identity: 192
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 52, 0

Conread position: 264-532
Cow position:
Alignm length: 270
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 186, 44

Conread position: 264-537
Cow position:
Alignm length: 275
Alignm identity: 195
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 255, 47

Conread position: 277-574
Cow position:
Alignm length: 305
Alignm identity: 194
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 137, 155

Conread position: 281-551
Cow position:
Alignm length: 273
Alignm identity: 181
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 44, 32

Show alignments to all cow chromosomes.