Cow genome map
Conread name: | rfcc33b_d9.y1 |
Conread position: | 1-315 |
Cow position: | chr7:13928819-13928490 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 17 |
Conread position: | 1-412 |
Cow position: | chr7:54186855-54186427 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 331 |
Conread position: | 1-434 |
Cow position: | chr7:26737998-26737553 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 43 |
Conread position: | 1-438 |
Cow position: | chr7:65819174-65818724 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 178 |
Conread position: | 1-439 |
Cow position: | chr7:19069248-19068795 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 331 |
Conread position: | 1-471 |
Cow position: | chr7:34082983-34083479 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 79 |
Conread position: | 1-544 |
Cow position: | chr7:26837966-26838534 (view UCSC Genome Browser custom track) |
Alignm length: | 579 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 223 |
Conread position: | 1-554 |
Cow position: | chr7:19466945-19466383 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 331 |
Conread position: | 1-562 |
Cow position: | chr7:56887459-56886891 (view UCSC Genome Browser custom track) |
Alignm length: | 588 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 335 |
Conread position: | 1-572 |
Cow position: | chr7:12659674-12659095 (view UCSC Genome Browser custom track) |
Alignm length: | 597 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 48 |
Conread position: | 1-574 |
Cow position: | chr7:3297125-3296535 (view UCSC Genome Browser custom track) |
Alignm length: | 597 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 331 |
Conread position: | 1-574 |
Cow position: | chr7:20779454-20780052 (view UCSC Genome Browser custom track) |
Alignm length: | 610 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 222 |
Conread position: | 1-574 |
Cow position: | chr7:23099723-23099138 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 447 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 67 |
Conread position: | 1-574 |
Cow position: | chr7:35110887-35111476 (view UCSC Genome Browser custom track) |
Alignm length: | 599 |
Alignm identity: | 445 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 337 |
Conread position: | 1-574 |
Cow position: | chr7:59437783-59438371 (view UCSC Genome Browser custom track) |
Alignm length: | 603 |
Alignm identity: | 440 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 256 |
Conread position: | 2-455 |
Cow position: | chr7:58866886-58867363 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 262 |
Conread position: | 2-550 |
Cow position: | chr7:42296750-42296189 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 328 |
Conread position: | 2-574 |
Cow position: | chr7:48666727-48667326 (view UCSC Genome Browser custom track) |
Alignm length: | 614 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 165 |
Conread position: | 3-438 |
Cow position: | chr7:40404822-40405272 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 330 |
Conread position: | 3-464 |
Cow position: | chr7:47045775-47046239 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 328 |
Conread position: | 3-552 |
Cow position: | chr7:29509297-29509836 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 126 |
Conread position: | 3-552 |
Cow position: | chr7:30115401-30114849 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 72 |
Conread position: | 3-555 |
Cow position: | chr7:21315439-21315994 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 19 |
Conread position: | 3-574 |
Cow position: | chr7:10427870-10427282 (view UCSC Genome Browser custom track) |
Alignm length: | 595 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 331 |
Conread position: | 3-574 |
Cow position: | chr7:32239948-32240533 (view UCSC Genome Browser custom track) |
Alignm length: | 601 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 176 |
Conread position: | 3-574 |
Cow position: | chr7:39325089-39325646 (view UCSC Genome Browser custom track) |
Alignm length: | 588 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 89 |
Conread position: | 5-463 |
Cow position: | chr7:47876465-47875987 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 41 |
Conread position: | 6-574 |
Cow position: | chr7:58302626-58302039 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 440 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 330 |
Conread position: | 14-574 |
Cow position: | chr7:36745640-36746223 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 322 |
Conread position: | 16-552 |
Cow position: | chr7:23276941-23276390 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 156 |
Conread position: | 32-552 |
Cow position: | chr7:19798587-19798050 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 304 |
Conread position: | 37-554 |
Cow position: | chr7:62602561-62603067 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 170, 45 |
Conread position: | 37-574 |
Cow position: | chr7:1721617-1721069 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 147 |
Conread position: | 49-542 |
Cow position: | chr7:1943649-1944150 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 106 |
Conread position: | 65-574 |
Cow position: | chr7:46857576-46857056 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 269 |
Conread position: | 87-494 |
Cow position: | chr7:9929018-9928585 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 131 |
Conread position: | 90-539 |
Cow position: | chr7:53034915-53034444 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 246 |
Conread position: | 92-465 |
Cow position: | chr7:33280806-33280417 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 242 |
Conread position: | 92-552 |
Cow position: | chr7:43907621-43908089 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 84 |
Conread position: | 131-451 |
Cow position: | chr7:41444786-41445107 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 209 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 68, 94 |
Conread position: | 131-555 |
Cow position: | chr7:18872667-18873098 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 193 |
Conread position: | 131-558 |
Cow position: | chr7:38400536-38400973 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 28 |
Conread position: | 131-572 |
Cow position: | chr7:15654621-15654174 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 108 |
Conread position: | 133-565 |
Cow position: | chr7:59877889-59878330 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 195 |
Conread position: | 137-552 |
Cow position: | chr7:26632354-26631929 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 63 |
Conread position: | 138-307 |
Cow position: | chr7:51872250-51872067 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 143 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 138-455 |
Cow position: | chr7:45955362-45955694 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 233 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 138-523 |
Cow position: | chr7:43940798-43941193 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 187 |
Conread position: | 139-554 |
Cow position: | chr7:53361921-53361494 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 190 |
Conread position: | 139-555 |
Cow position: | chr7:45098991-45099421 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 286 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 70, 202 |
Conread position: | 139-574 |
Cow position: | chr7:21572747-21573186 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 193 |
Conread position: | 139-574 |
Cow position: | chr7:35778912-35779353 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 184 |
Conread position: | 142-542 |
Cow position: | chr7:51420722-51421132 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 260 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 70, 183 |
Conread position: | 147-532 |
Cow position: | chr7:28427493-28427878 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 281 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 71, 40 |
Conread position: | 148-574 |
Cow position: | chr7:26011881-26012328 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 283 |
Conread position: | 154-552 |
Cow position: | chr7:48243151-48243556 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 175 |
Conread position: | 157-536 |
Cow position: | chr7:29121258-29121650 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 178 |
Conread position: | 160-518 |
Cow position: | chr7:53772826-53772466 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 268 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 56, 174 |
Conread position: | 161-550 |
Cow position: | chr7:39903591-39903980 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 162 |
Conread position: | 162-552 |
Cow position: | chr7:13645879-13645472 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 165 |
Conread position: | 169-565 |
Cow position: | chr7:5283569-5283975 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 156 |
Conread position: | 172-574 |
Cow position: | chr7:31171455-31171048 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 155 |
Conread position: | 174-574 |
Cow position: | chr7:25414892-25415299 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 156 |
Conread position: | 176-521 |
Cow position: | chr7:11783922-11783568 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 14 |
Conread position: | 184-574 |
Cow position: | chr7:32894748-32894346 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 143 |
Conread position: | 203-493 |
Cow position: | chr7:55085506-55085212 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 7 |
Conread position: | 203-513 |
Cow position: | chr7:68772973-68772652 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 225 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 50, 7 |
Conread position: | 203-532 |
Cow position: | chr7:10760333-10759997 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 7 |
Conread position: | 211-553 |
Cow position: | chr7:39498488-39498136 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 278 |
Conread position: | 214-459 |
Cow position: | chr7:4840377-4840625 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 178 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 43, 109 |
Conread position: | 214-562 |
Cow position: | chr7:14631912-14632269 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 112 |
Conread position: | 214-573 |
Cow position: | chr7:68050650-68051001 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 260 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 48, 108 |
Conread position: | 214-574 |
Cow position: | chr7:23206097-23205726 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 119 |
Conread position: | 215-451 |
Cow position: | chr7:29302847-29302604 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 175 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 47, 109 |
Conread position: | 260-443 |
Cow position: | chr7:42894008-42894191 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 130 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 260-520 |
Cow position: | chr7:38901729-38901985 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 196 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 217, 49 |
Conread position: | 260-552 |
Cow position: | chr7:18388800-18388516 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 49 |
Conread position: | 260-554 |
Cow position: | chr7:37568625-37568914 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 53 |
Conread position: | 260-554 |
Cow position: | chr7:49942816-49942542 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 209 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 260-558 |
Cow position: | chr7:23646204-23646491 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 260-558 |
Cow position: | chr7:46117053-46116763 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 53 |
Conread position: | 260-562 |
Cow position: | chr7:47775468-47775758 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 260-563 |
Cow position: | chr7:49820985-49820696 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 217 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 260-565 |
Cow position: | chr7:41328424-41328143 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 216 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 43, 58 |
Conread position: | 260-569 |
Cow position: | chr7:23619488-23619187 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 261-574 |
Cow position: | chr7:23818533-23818835 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 64 |
Conread position: | 264-574 |
Cow position: | chr7:36569463-36569750 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 223 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 87, 49 |
Conread position: | 275-547 |
Cow position: | chr7:44039106-44039369 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 277-574 |
Cow position: | chr7:3728701-3728991 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 0 |
Conread position: | 298-554 |
Cow position: | chr7:2172385-2172641 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 184 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.