Cow genome map

Conread name: rfcc33b_d9.y1

Conread position: 1-455
Cow position:
Alignm length: 482
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 43

Conread position: 1-455
Cow position:
Alignm length: 481
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 48

Conread position: 1-457
Cow position:
Alignm length: 481
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 1-458
Cow position:
Alignm length: 481
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-509
Cow position:
Alignm length: 532
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 16

Conread position: 1-552
Cow position:
Alignm length: 575
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 331

Conread position: 1-558
Cow position:
Alignm length: 579
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 331

Conread position: 1-562
Cow position:
Alignm length: 586
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 335

Conread position: 1-565
Cow position:
Alignm length: 588
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 331

Conread position: 2-441
Cow position:
Alignm length: 457
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 11

Conread position: 2-463
Cow position:
Alignm length: 484
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 333

Conread position: 2-487
Cow position:
Alignm length: 514
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 60

Conread position: 2-552
Cow position:
Alignm length: 575
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 217

Conread position: 2-552
Cow position:
Alignm length: 579
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 335

Conread position: 2-552
Cow position:
Alignm length: 571
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 43

Conread position: 2-565
Cow position:
Alignm length: 589
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 17

Conread position: 2-574
Cow position:
Alignm length: 597
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 165

Conread position: 2-574
Cow position:
Alignm length: 597
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 110

Conread position: 2-574
Cow position:
Alignm length: 595
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 334

Conread position: 3-491
Cow position:
Alignm length: 512
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 331

Conread position: 3-494
Cow position:
Alignm length: 515
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 95

Conread position: 3-574
Cow position:
Alignm length: 600
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 155

Conread position: 4-554
Cow position:
Alignm length: 574
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 327

Conread position: 6-552
Cow position:
Alignm length: 570
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 326

Conread position: 7-444
Cow position:
Alignm length: 460
Alignm identity: 310
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 113, 60

Conread position: 19-435
Cow position:
Alignm length: 441
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 23

Conread position: 34-544
Cow position:
Alignm length: 536
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 77

Conread position: 45-550
Cow position:
Alignm length: 529
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 291

Conread position: 46-455
Cow position:
Alignm length: 433
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 202

Conread position: 47-436
Cow position:
Alignm length: 415
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 291

Conread position: 47-554
Cow position:
Alignm length: 545
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 205

Conread position: 48-554
Cow position:
Alignm length: 529
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 121

Conread position: 53-433
Cow position:
Alignm length: 400
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 102

Conread position: 66-565
Cow position:
Alignm length: 525
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 106

Conread position: 66-574
Cow position:
Alignm length: 549
Alignm identity: 359
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 65, 265

Conread position: 69-574
Cow position:
Alignm length: 529
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 265

Conread position: 80-562
Cow position:
Alignm length: 509
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 12

Conread position: 87-443
Cow position:
Alignm length: 374
Alignm identity: 252
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 129, 57

Conread position: 89-565
Cow position:
Alignm length: 503
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 247

Conread position: 111-552
Cow position:
Alignm length: 465
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 221

Conread position: 131-552
Cow position:
Alignm length: 432
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 190

Conread position: 131-565
Cow position:
Alignm length: 451
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 194

Conread position: 131-574
Cow position:
Alignm length: 449
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 182

Conread position: 132-574
Cow position:
Alignm length: 462
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 193

Conread position: 134-554
Cow position:
Alignm length: 439
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 194

Conread position: 134-574
Cow position:
Alignm length: 457
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 191

Conread position: 138-565
Cow position:
Alignm length: 444
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 187

Conread position: 139-450
Cow position:
Alignm length: 328
Alignm identity: 231
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 77, 23

Conread position: 152-552
Cow position:
Alignm length: 417
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 173

Conread position: 154-455
Cow position:
Alignm length: 318
Alignm identity: 221
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 62, 18

Conread position: 154-550
Cow position:
Alignm length: 415
Alignm identity: 273
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 55, 249

Conread position: 154-555
Cow position:
Alignm length: 418
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 102

Conread position: 156-444
Cow position:
Alignm length: 299
Alignm identity: 217
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 7, 160

Conread position: 157-452
Cow position:
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 168

Conread position: 166-574
Cow position:
Alignm length: 426
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 9

Conread position: 170-574
Cow position:
Alignm length: 421
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 159

Conread position: 175-543
Cow position:
Alignm length: 384
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 153

Conread position: 178-555
Cow position:
Alignm length: 402
Alignm identity: 267
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 27, 158

Conread position: 192-550
Cow position:
Alignm length: 375
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 135

Conread position: 194-455
Cow position:
Alignm length: 278
Alignm identity: 201
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 15, 135

Conread position: 195-480
Cow position:
Alignm length: 302
Alignm identity: 221
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 21, 131

Conread position: 200-560
Cow position:
Alignm length: 383
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 129

Conread position: 214-443
Cow position:
Alignm length: 244
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 109

Conread position: 214-540
Cow position:
Alignm length: 356
Alignm identity: 239
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 116

Conread position: 215-550
Cow position:
Alignm length: 350
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 113

Conread position: 260-453
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 48, 176

Conread position: 260-513
Cow position:
Alignm length: 265
Alignm identity: 189
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 183, 51

Conread position: 260-517
Cow position:
Alignm length: 258
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 260-547
Cow position:
Alignm length: 288
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 0

Conread position: 260-552
Cow position:
Alignm length: 293
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 0

Conread position: 260-558
Cow position:
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-560
Cow position:
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 51

Conread position: 260-563
Cow position:
Alignm length: 307
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 0

Conread position: 260-565
Cow position:
Alignm length: 306
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 260-574
Cow position:
Alignm length: 316
Alignm identity: 222
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 171, 51

Conread position: 260-574
Cow position:
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 264-481
Cow position:
Alignm length: 220
Alignm identity: 150
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 53, 177

Conread position: 264-515
Cow position:
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 48

Conread position: 264-554
Cow position:
Alignm length: 291
Alignm identity: 190
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 264-554
Cow position:
Alignm length: 295
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 47

Conread position: 264-555
Cow position:
Alignm length: 293
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 52

Conread position: 275-558
Cow position:
Alignm length: 284
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 290-574
Cow position:
Alignm length: 293
Alignm identity: 212
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 92, 21

Conread position: 294-547
Cow position:
Alignm length: 259
Alignm identity: 183
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 12, 24

Show alignments to all cow chromosomes.