Cow genome map
| Conread name: | rfce15c_d5.y1 |
| Conread position: | 11-229 |
| Cow position: | chr11:17036573-17036361 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 11-248 |
| Cow position: | chr11:1625269-1625031 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 137, 115 |
| Conread position: | 11-248 |
| Cow position: | chr11:46922931-46922697 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 122, 138 |
| Conread position: | 11-250 |
| Cow position: | chr11:21885787-21886022 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 8, 87 |
| Conread position: | 11-263 |
| Cow position: | chr11:39060647-39060403 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 15-173 |
| Cow position: | chr11:16342270-16342111 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 15-229 |
| Cow position: | chr11:80564252-80564468 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 139, 118 |
| Conread position: | 15-239 |
| Cow position: | chr11:29960257-29960473 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 15-245 |
| Cow position: | chr11:20238635-20238863 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 15-246 |
| Cow position: | chr11:30830655-30830435 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 15-259 |
| Cow position: | chr11:80556182-80556423 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 223, 18 |
| Conread position: | 15-262 |
| Cow position: | chr11:2917627-2917391 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 15-264 |
| Cow position: | chr11:44031964-44032208 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 101 |
| Conread position: | 16-200 |
| Cow position: | chr11:34121158-34121341 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 96, 117 |
| Conread position: | 16-202 |
| Cow position: | chr11:45646633-45646448 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 121, 70 |
| Conread position: | 16-214 |
| Cow position: | chr11:11558131-11558327 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 130, 136 |
| Conread position: | 16-218 |
| Cow position: | chr11:39499316-39499515 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 16-245 |
| Cow position: | chr11:18851868-18852090 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 16-256 |
| Cow position: | chr11:62812990-62812758 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 16-272 |
| Cow position: | chr11:52380912-52380657 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 222, 151 |
| Conread position: | 19-229 |
| Cow position: | chr11:77319377-77319583 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 20-229 |
| Cow position: | chr11:62620340-62620547 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 111, 106 |
| Conread position: | 20-268 |
| Cow position: | chr11:34646553-34646805 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 148, 185 |
Show alignments to all cow chromosomes.