Cow genome map
| Conread name: | rfce15c_d5.y1 |
| Conread position: | 5-257 |
| Cow position: | chr16:12324422-12324670 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 115, 111 |
| Conread position: | 10-295 |
| Cow position: | chr16:19643860-19644137 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 130 |
| Conread position: | 15-202 |
| Cow position: | chr16:9553036-9553216 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 96, 49 |
| Conread position: | 15-202 |
| Cow position: | chr16:21370210-21370023 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 142, 63 |
| Conread position: | 15-227 |
| Cow position: | chr16:11135004-11134799 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 15-227 |
| Cow position: | chr16:25386954-25387155 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 15-229 |
| Cow position: | chr16:38708860-38708648 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 78, 39 |
| Conread position: | 15-243 |
| Cow position: | chr16:13689643-13689865 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 15-244 |
| Cow position: | chr16:45122012-45122245 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 139, 191 |
| Conread position: | 15-245 |
| Cow position: | chr16:47820545-47820775 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 144, 67 |
| Conread position: | 15-246 |
| Cow position: | chr16:20824454-20824682 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 15-247 |
| Cow position: | chr16:52170033-52170261 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 222, 9 |
| Conread position: | 15-248 |
| Cow position: | chr16:45677955-45678183 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 15-251 |
| Cow position: | chr16:25839597-25839821 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 15-254 |
| Cow position: | chr16:48398277-48398042 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 222, 136 |
| Conread position: | 15-260 |
| Cow position: | chr16:42078870-42078626 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 223, 67 |
| Conread position: | 15-262 |
| Cow position: | chr16:33198460-33198215 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 141, 42 |
| Conread position: | 15-263 |
| Cow position: | chr16:30305835-30305602 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 118, 61 |
| Conread position: | 15-273 |
| Cow position: | chr16:1582949-1582699 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 15-275 |
| Cow position: | chr16:11584427-11584177 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 16-234 |
| Cow position: | chr16:23729946-23729725 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 93, 139 |
| Conread position: | 16-245 |
| Cow position: | chr16:424835-424605 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 150, 107 |
| Conread position: | 16-264 |
| Cow position: | chr16:31149356-31149594 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 17-263 |
| Cow position: | chr16:48956775-48957020 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 20, 135 |
| Conread position: | 18-179 |
| Cow position: | chr16:33235181-33235024 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 20-248 |
| Cow position: | chr16:45294526-45294756 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 90, 134 |
| Conread position: | 21-230 |
| Cow position: | chr16:33645998-33646204 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 147, 127 |
| Conread position: | 23-258 |
| Cow position: | chr16:17135075-17134845 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 33-229 |
| Cow position: | chr16:34205069-34204877 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 180, 118 |
| Conread position: | 42-266 |
| Cow position: | chr16:19478761-19478544 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 82-248 |
| Cow position: | chr16:31011371-31011535 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
Show alignments to all cow chromosomes.