Cow genome map
| Conread name: | rfce15c_d5.y1 |
| Conread position: | 4-270 |
| Cow position: | chr18:55505340-55505595 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 8-247 |
| Cow position: | chr18:51383459-51383224 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 226, 30 |
| Conread position: | 10-209 |
| Cow position: | chr18:28657973-28657780 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 13-251 |
| Cow position: | chr18:44917698-44917929 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 15-209 |
| Cow position: | chr18:52413908-52414108 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 193 |
| Conread position: | 15-242 |
| Cow position: | chr18:12242220-12242444 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 153, 59 |
| Conread position: | 15-246 |
| Cow position: | chr18:38937765-38937991 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 15-248 |
| Cow position: | chr18:2773449-2773214 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 153, 133 |
| Conread position: | 15-248 |
| Cow position: | chr18:2776952-2776717 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 153, 130 |
| Conread position: | 15-248 |
| Cow position: | chr18:22790142-22789918 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 15-248 |
| Cow position: | chr18:23630661-23630440 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 219, 61 |
| Conread position: | 15-252 |
| Cow position: | chr18:1954646-1954404 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 139, 193 |
| Conread position: | 15-254 |
| Cow position: | chr18:31082405-31082166 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 130, 177 |
| Conread position: | 15-260 |
| Cow position: | chr18:22569123-22568887 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 15-264 |
| Cow position: | chr18:17391050-17390804 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 153, 72 |
| Conread position: | 15-267 |
| Cow position: | chr18:49038405-49038642 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 15-284 |
| Cow position: | chr18:1571292-1571027 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 216, 42 |
| Conread position: | 16-245 |
| Cow position: | chr18:10891459-10891680 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 102, 68 |
| Conread position: | 17-245 |
| Cow position: | chr18:9974383-9974160 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 21-229 |
| Cow position: | chr18:9365868-9366076 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 41, 147 |
| Conread position: | 24-248 |
| Cow position: | chr18:50632490-50632271 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 214, 115 |
| Conread position: | 33-243 |
| Cow position: | chr18:11672004-11672222 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 121, 59 |
| Conread position: | 42-266 |
| Cow position: | chr18:41702807-41703020 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 44-248 |
| Cow position: | chr18:49603071-49602869 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 76, 72 |
Show alignments to all cow chromosomes.