Cow genome map
| Conread name: | rfce15c_d5.y1 |
| Conread position: | 6-250 |
| Cow position: | chr19:16096598-16096357 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 15-227 |
| Cow position: | chr19:3621395-3621603 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 181, 101 |
| Conread position: | 15-227 |
| Cow position: | chr19:33913492-33913704 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 153, 187 |
| Conread position: | 15-229 |
| Cow position: | chr19:48960363-48960569 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 15-230 |
| Cow position: | chr19:21378503-21378289 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 152, 8 |
| Conread position: | 15-230 |
| Cow position: | chr19:42517290-42517077 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 15-238 |
| Cow position: | chr19:23394752-23394970 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 15-242 |
| Cow position: | chr19:38732104-38732327 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 116, 111 |
| Conread position: | 15-243 |
| Cow position: | chr19:42768133-42767913 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 43, 132 |
| Conread position: | 15-245 |
| Cow position: | chr19:28810352-28810124 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 84, 152 |
| Conread position: | 15-246 |
| Cow position: | chr19:10238702-10238929 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 15-248 |
| Cow position: | chr19:7668667-7668891 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 223, 61 |
| Conread position: | 15-248 |
| Cow position: | chr19:22043387-22043161 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 216, 95 |
| Conread position: | 15-248 |
| Cow position: | chr19:23889522-23889291 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 15-248 |
| Cow position: | chr19:33575489-33575714 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 18 |
| Conread position: | 15-259 |
| Cow position: | chr19:23087949-23088185 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 15-274 |
| Cow position: | chr19:11560076-11559817 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 16-248 |
| Cow position: | chr19:12052880-12052650 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 152, 72 |
| Conread position: | 16-248 |
| Cow position: | chr19:12067711-12067941 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 152, 72 |
| Conread position: | 16-255 |
| Cow position: | chr19:49221655-49221422 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 16-264 |
| Cow position: | chr19:7637269-7637025 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 16-269 |
| Cow position: | chr19:15852902-15853138 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 16-283 |
| Cow position: | chr19:23378642-23378904 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 261, 151 |
| Conread position: | 19-229 |
| Cow position: | chr19:34654641-34654434 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 20-245 |
| Cow position: | chr19:24005625-24005846 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 21 |
| Conread position: | 20-260 |
| Cow position: | chr19:23784445-23784219 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 233, 38 |
| Conread position: | 27-261 |
| Cow position: | chr19:11646544-11646769 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 33-229 |
| Cow position: | chr19:52728595-52728787 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 84, 77 |
| Conread position: | 37-230 |
| Cow position: | chr19:19916433-19916246 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 80-247 |
| Cow position: | chr19:22414236-22414073 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.