Cow genome map
| Conread name: | rfce15c_d5.y1 |
| Conread position: | 5-248 |
| Cow position: | chr3:78077127-78077372 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 100, 150 |
| Conread position: | 10-265 |
| Cow position: | chr3:78092564-78092313 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 157, 111 |
| Conread position: | 11-268 |
| Cow position: | chr3:70565790-70565528 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 157, 139 |
| Conread position: | 12-228 |
| Cow position: | chr3:59610769-59610557 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 14-292 |
| Cow position: | chr3:3316864-3316585 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 139, 73 |
| Conread position: | 15-229 |
| Cow position: | chr3:10668927-10668716 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 107, 61 |
| Conread position: | 15-229 |
| Cow position: | chr3:15950961-15950754 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 15-229 |
| Cow position: | chr3:22165463-22165252 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 153, 67 |
| Conread position: | 15-229 |
| Cow position: | chr3:74079684-74079475 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 15-239 |
| Cow position: | chr3:44932468-44932686 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 216, 90 |
| Conread position: | 15-240 |
| Cow position: | chr3:10958288-10958070 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 15-240 |
| Cow position: | chr3:49363061-49363281 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 15-242 |
| Cow position: | chr3:52608134-52608354 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 15-246 |
| Cow position: | chr3:55177794-55177571 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 15-248 |
| Cow position: | chr3:68004750-68004525 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 15-250 |
| Cow position: | chr3:7337829-7337603 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 170, 5 |
| Conread position: | 15-258 |
| Cow position: | chr3:54506659-54506896 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 15-264 |
| Cow position: | chr3:50768631-50768877 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 15-264 |
| Cow position: | chr3:59604798-59605040 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 15-273 |
| Cow position: | chr3:64196778-64197030 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 15-276 |
| Cow position: | chr3:19585816-19586070 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 15-390 |
| Cow position: | chr3:55189802-55189413 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 72, 122 |
| Conread position: | 16-173 |
| Cow position: | chr3:56059764-56059918 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 102, 94 |
| Conread position: | 16-195 |
| Cow position: | chr3:19626553-19626377 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 122, 90 |
| Conread position: | 16-230 |
| Cow position: | chr3:26603602-26603382 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 16-261 |
| Cow position: | chr3:60264763-60264530 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 17-244 |
| Cow position: | chr3:48072928-48072706 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 214, 131 |
| Conread position: | 17-257 |
| Cow position: | chr3:68156676-68156918 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 74, 191 |
| Conread position: | 37-258 |
| Cow position: | chr3:67407392-67407179 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 83-290 |
| Cow position: | chr3:82425059-82424862 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
Show alignments to all cow chromosomes.