Cow genome map
| Conread name: | rfce15c_d5.y1 |
| Conread position: | 6-276 |
| Cow position: | chr4:42423845-42423576 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 5, 13 |
| Conread position: | 10-260 |
| Cow position: | chr4:18951937-18952189 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 134, 159 |
| Conread position: | 12-245 |
| Cow position: | chr4:21874141-21874372 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 144, 157 |
| Conread position: | 12-248 |
| Cow position: | chr4:8182674-8182433 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 49, 160 |
| Conread position: | 15-200 |
| Cow position: | chr4:38935328-38935512 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 116, 107 |
| Conread position: | 15-219 |
| Cow position: | chr4:38210006-38209806 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 15-227 |
| Cow position: | chr4:48485963-48486173 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 15-228 |
| Cow position: | chr4:38157119-38156915 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 15-228 |
| Cow position: | chr4:40414659-40414450 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 15-229 |
| Cow position: | chr4:52832047-52831836 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 15-229 |
| Cow position: | chr4:68590746-68590948 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 15-247 |
| Cow position: | chr4:20027134-20026908 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 15-250 |
| Cow position: | chr4:31136725-31136955 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 152, 45 |
| Conread position: | 15-263 |
| Cow position: | chr4:4319183-4318943 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 119, 132 |
| Conread position: | 15-263 |
| Cow position: | chr4:19118986-19119228 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 15-263 |
| Cow position: | chr4:44773074-44772825 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 153, 190 |
| Conread position: | 15-266 |
| Cow position: | chr4:36290593-36290834 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 15-267 |
| Cow position: | chr4:11969425-11969671 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 132, 63 |
| Conread position: | 16-173 |
| Cow position: | chr4:44903264-44903417 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 16-248 |
| Cow position: | chr4:60719071-60719290 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 16-275 |
| Cow position: | chr4:69290773-69290520 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 152, 133 |
| Conread position: | 16-321 |
| Cow position: | chr4:28772097-28771786 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 205, 132 |
| Conread position: | 19-247 |
| Cow position: | chr4:10558509-10558736 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 53, 64 |
| Conread position: | 22-229 |
| Cow position: | chr4:13344514-13344715 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 23-248 |
| Cow position: | chr4:60527157-60527379 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 23-269 |
| Cow position: | chr4:33838823-33838588 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 47-240 |
| Cow position: | chr4:42374155-42373965 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
Show alignments to all cow chromosomes.