Cow genome map
| Conread name: | rfce15c_d5.y1 |
| Conread position: | 10-260 |
| Cow position: | chr6:61269324-61269575 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 194, 5 |
| Conread position: | 10-266 |
| Cow position: | chr6:30023896-30024137 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 11-245 |
| Cow position: | chr6:18118037-18117808 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 224, 56 |
| Conread position: | 12-248 |
| Cow position: | chr6:25615082-25614845 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 83, 159 |
| Conread position: | 15-240 |
| Cow position: | chr6:46465837-46466056 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 105, 95 |
| Conread position: | 15-248 |
| Cow position: | chr6:38640249-38640482 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 153, 133 |
| Conread position: | 15-251 |
| Cow position: | chr6:60273995-60273761 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 84, 133 |
| Conread position: | 15-258 |
| Cow position: | chr6:21470413-21470180 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 15-259 |
| Cow position: | chr6:10105963-10105725 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 216, 133 |
| Conread position: | 15-263 |
| Cow position: | chr6:3351044-3351289 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 15-265 |
| Cow position: | chr6:36202837-36203082 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 123, 61 |
| Conread position: | 15-303 |
| Cow position: | chr6:26915347-26915623 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 16-202 |
| Cow position: | chr6:61524188-61524003 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 152, 132 |
| Conread position: | 16-228 |
| Cow position: | chr6:46860150-46859944 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 16-246 |
| Cow position: | chr6:24468378-24468155 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 16-258 |
| Cow position: | chr6:15243271-15243515 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 5, 191 |
| Conread position: | 16-273 |
| Cow position: | chr6:62056631-62056878 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 17-200 |
| Cow position: | chr6:2547273-2547454 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 17-245 |
| Cow position: | chr6:29485100-29485326 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 61, 134 |
| Conread position: | 17-248 |
| Cow position: | chr6:2078797-2078568 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 209, 153 |
| Conread position: | 19-248 |
| Cow position: | chr6:51581232-51581009 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 21-264 |
| Cow position: | chr6:12761301-12761541 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 147, 77 |
| Conread position: | 23-283 |
| Cow position: | chr6:52478387-52478131 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 37-240 |
| Cow position: | chr6:21083503-21083303 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 111, 0 |
Show alignments to all cow chromosomes.