Cow genome map
| Conread name: | rfce15c_d5.y1 |
| Conread position: | 6-230 |
| Cow position: | chr9:57131556-57131339 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 11-248 |
| Cow position: | chr9:6189306-6189542 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 20, 140 |
| Conread position: | 15-229 |
| Cow position: | chr9:17872057-17872265 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 15-242 |
| Cow position: | chr9:21460101-21460324 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 157, 63 |
| Conread position: | 15-242 |
| Cow position: | chr9:45285482-45285710 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 131, 155 |
| Conread position: | 15-248 |
| Cow position: | chr9:4341106-4341333 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 15-259 |
| Cow position: | chr9:37199180-37198938 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 153, 131 |
| Conread position: | 15-260 |
| Cow position: | chr9:17840625-17840868 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 15-260 |
| Cow position: | chr9:33584633-33584873 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 15-263 |
| Cow position: | chr9:34286852-34286605 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 153, 133 |
| Conread position: | 16-202 |
| Cow position: | chr9:39011417-39011602 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 150, 129 |
| Conread position: | 16-229 |
| Cow position: | chr9:43757593-43757386 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 52, 126 |
| Conread position: | 16-246 |
| Cow position: | chr9:13169611-13169840 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 152, 123 |
| Conread position: | 16-266 |
| Cow position: | chr9:12910349-12910594 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 16-289 |
| Cow position: | chr9:41728310-41728041 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 243, 82 |
| Conread position: | 17-202 |
| Cow position: | chr9:33119837-33120023 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 19-261 |
| Cow position: | chr9:61303049-61302816 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 96, 91 |
| Conread position: | 20-166 |
| Cow position: | chr9:55354659-55354515 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 20-229 |
| Cow position: | chr9:34958008-34958210 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 21-268 |
| Cow position: | chr9:26279122-26279370 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 137, 129 |
| Conread position: | 40-248 |
| Cow position: | chr9:19771394-19771183 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 131 |
| Conread position: | 42-257 |
| Cow position: | chr9:12773716-12773508 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 78, 64 |
| Conread position: | 51-248 |
| Cow position: | chr9:32052293-32052100 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 143, 97 |
Show alignments to all cow chromosomes.