Cow genome map
| Conread name: | rfce15c_d5.y1 |
| Conread position: | 10-265 |
| Cow position: | chrX:26843271-26843012 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 50 |
| Conread position: | 14-280 |
| Cow position: | chrX:22115315-22115052 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 135, 217 |
| Conread position: | 15-229 |
| Cow position: | chrX:1466165-1466379 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 186, 135 |
| Conread position: | 15-249 |
| Cow position: | chrX:34837060-34836835 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 228, 13 |
| Conread position: | 15-251 |
| Cow position: | chrX:22392981-22392747 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 223, 121 |
| Conread position: | 15-257 |
| Cow position: | chrX:2935960-2936196 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 15-260 |
| Cow position: | chrX:5118499-5118253 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 135 |
| Conread position: | 15-261 |
| Cow position: | chrX:11656084-11656325 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 15-262 |
| Cow position: | chrX:39290362-39290599 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 15-272 |
| Cow position: | chrX:31436477-31436728 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 15-272 |
| Cow position: | chrX:32208819-32208571 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 15-275 |
| Cow position: | chrX:6599779-6599513 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 139, 194 |
| Conread position: | 15-281 |
| Cow position: | chrX:47345330-47345598 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 114, 156 |
| Conread position: | 15-282 |
| Cow position: | chrX:16836283-16836032 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 16-255 |
| Cow position: | chrX:37781105-37780870 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 16-260 |
| Cow position: | chrX:27145608-27145844 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 16-265 |
| Cow position: | chrX:34505045-34504797 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 76, 111 |
| Conread position: | 17-228 |
| Cow position: | chrX:22482692-22482474 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 40, 76 |
| Conread position: | 17-229 |
| Cow position: | chrX:40685323-40685113 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 151, 131 |
| Conread position: | 17-248 |
| Cow position: | chrX:42927819-42927595 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 19-245 |
| Cow position: | chrX:29050257-29050476 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 212, 55 |
| Conread position: | 22-266 |
| Cow position: | chrX:38301819-38302068 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 48 |
| Conread position: | 23-243 |
| Cow position: | chrX:29467767-29467553 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 25-262 |
| Cow position: | chrX:20957251-20957483 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 143, 177 |
| Conread position: | 26-243 |
| Cow position: | chrX:9252149-9251933 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 142, 124 |
| Conread position: | 37-260 |
| Cow position: | chrX:32866900-32867119 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 201, 111 |
| Conread position: | 41-248 |
| Cow position: | chrX:37072418-37072621 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 114, 0 |
Show alignments to all cow chromosomes.