Cow genome map
| Conread name: | rgul0101_g23.y1 |
| Conread position: | 1-154 |
| Cow position: | chr1:19145665-19145512 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-197 |
| Cow position: | chr1:89492741-89492549 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-203 |
| Cow position: | chr1:31352137-31351940 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 162 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 177, 0 |
| Conread position: | 1-211 |
| Cow position: | chr1:72285069-72284856 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1-226 |
| Cow position: | chr1:27494736-27494957 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-227 |
| Cow position: | chr1:5013302-5013077 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 214, 0 |
| Conread position: | 1-227 |
| Cow position: | chr1:43650409-43650183 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 22 |
| Conread position: | 1-249 |
| Cow position: | chr1:100591277-100591034 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 215-474 |
| Cow position: | chr1:33206935-33206666 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 15, 200 |
| Conread position: | 230-473 |
| Cow position: | chr1:78857364-78857120 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 76, 154 |
| Conread position: | 232-472 |
| Cow position: | chr1:101834784-101835021 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 12, 58 |
| Conread position: | 236-472 |
| Cow position: | chr1:64572484-64572719 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 146 |
| Conread position: | 236-473 |
| Cow position: | chr1:74832393-74832634 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 46, 109 |
| Conread position: | 237-460 |
| Cow position: | chr1:81913179-81912949 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 63, 91 |
| Conread position: | 238-470 |
| Cow position: | chr1:101177488-101177726 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 63, 146 |
| Conread position: | 241-378 |
| Cow position: | chr1:50991908-50992050 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 241-464 |
| Cow position: | chr1:98511903-98512134 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 37, 117 |
| Conread position: | 241-470 |
| Cow position: | chr1:99221375-99221139 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 131, 210 |
| Conread position: | 241-470 |
| Cow position: | chr1:100474209-100474442 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 11, 144 |
| Conread position: | 241-472 |
| Cow position: | chr1:3965812-3966034 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 241-472 |
| Cow position: | chr1:8287654-8287425 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 60, 114 |
| Conread position: | 241-472 |
| Cow position: | chr1:22192745-22192975 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 241-472 |
| Cow position: | chr1:46030936-46031166 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 145 |
| Conread position: | 241-473 |
| Cow position: | chr1:77739697-77739930 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 58 |
| Conread position: | 242-468 |
| Cow position: | chr1:24778013-24777783 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 9, 93 |
| Conread position: | 242-468 |
| Cow position: | chr1:65318551-65318778 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 10, 46 |
| Conread position: | 242-468 |
| Cow position: | chr1:82337800-82337579 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 137 |
| Conread position: | 242-468 |
| Cow position: | chr1:95835821-95835594 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 142 |
| Conread position: | 242-472 |
| Cow position: | chr1:30189126-30189362 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 10, 142 |
| Conread position: | 242-472 |
| Cow position: | chr1:34771527-34771294 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 10, 47 |
| Conread position: | 242-472 |
| Cow position: | chr1:43352678-43352448 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 137 |
| Conread position: | 242-473 |
| Cow position: | chr1:48214178-48213939 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 242-473 |
| Cow position: | chr1:91023489-91023262 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 141 |
| Conread position: | 243-472 |
| Cow position: | chr1:38419004-38419232 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 9, 52 |
| Conread position: | 243-472 |
| Cow position: | chr1:50930997-50930775 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 63, 43 |
| Conread position: | 243-475 |
| Cow position: | chr1:38706877-38706645 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 9, 142 |
| Conread position: | 244-470 |
| Cow position: | chr1:98897716-98897487 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 155 |
| Conread position: | 245-390 |
| Cow position: | chr1:45478879-45478735 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 251-468 |
| Cow position: | chr1:28563580-28563360 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 252-468 |
| Cow position: | chr1:6381759-6381977 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 49, 96 |
| Conread position: | 254-472 |
| Cow position: | chr1:24133071-24132858 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 52, 127 |
| Conread position: | 254-473 |
| Cow position: | chr1:45315647-45315425 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 47, 130 |
| Conread position: | 264-472 |
| Cow position: | chr1:96518696-96518907 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 269-468 |
| Cow position: | chr1:95049860-95049664 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 113 |
| Conread position: | 300-472 |
| Cow position: | chr1:75744901-75745065 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
Show alignments to all cow chromosomes.