Cow genome map
| Conread name: | rgul0101_g23.y1 |
| Conread position: | 1-197 |
| Cow position: | chr10:30720216-30720412 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 158 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 27, 22 |
| Conread position: | 1-203 |
| Cow position: | chr10:24293434-24293235 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1-203 |
| Cow position: | chr10:43489148-43489350 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 158 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-203 |
| Cow position: | chr10:65790781-65790579 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-215 |
| Cow position: | chr10:46226340-46226554 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 207 |
| Conread position: | 1-220 |
| Cow position: | chr10:34661002-34660788 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 18, 45 |
| Conread position: | 1-225 |
| Cow position: | chr10:38941640-38941865 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 221 |
| Conread position: | 1-226 |
| Cow position: | chr10:22320740-22320963 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 1-227 |
| Cow position: | chr10:8094114-8093889 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 98 |
| Conread position: | 1-227 |
| Cow position: | chr10:37041516-37041740 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 1-255 |
| Cow position: | chr10:9798997-9798749 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 204-473 |
| Cow position: | chr10:60491356-60491087 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 47, 15 |
| Conread position: | 215-467 |
| Cow position: | chr10:18042092-18042352 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 15, 175 |
| Conread position: | 231-472 |
| Cow position: | chr10:705059-704812 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 235-390 |
| Cow position: | chr10:15115553-15115715 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 237-472 |
| Cow position: | chr10:42230734-42230980 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 237-473 |
| Cow position: | chr10:54504547-54504779 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 25 |
| Conread position: | 238-472 |
| Cow position: | chr10:45379062-45378826 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 14, 147 |
| Conread position: | 241-375 |
| Cow position: | chr10:23936426-23936561 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 11, 47 |
| Conread position: | 241-436 |
| Cow position: | chr10:33084490-33084299 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 46 |
| Conread position: | 242-466 |
| Cow position: | chr10:52296444-52296665 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 10, 142 |
| Conread position: | 242-472 |
| Cow position: | chr10:13586651-13586878 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 201 |
| Conread position: | 242-472 |
| Cow position: | chr10:43273098-43272866 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 10, 158 |
| Conread position: | 243-395 |
| Cow position: | chr10:47651247-47651403 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 243-472 |
| Cow position: | chr10:24831135-24830896 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 151 |
| Conread position: | 243-472 |
| Cow position: | chr10:60960882-60961121 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 243-473 |
| Cow position: | chr10:38995176-38995411 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 161 |
| Conread position: | 244-468 |
| Cow position: | chr10:50042556-50042789 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 6, 42 |
| Conread position: | 244-472 |
| Cow position: | chr10:47690336-47690572 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 244-472 |
| Cow position: | chr10:48316998-48316769 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 8, 143 |
| Conread position: | 244-472 |
| Cow position: | chr10:62286505-62286740 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 244-473 |
| Cow position: | chr10:5151295-5151528 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 82 |
| Conread position: | 245-438 |
| Cow position: | chr10:13197882-13197685 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 148 |
| Conread position: | 246-473 |
| Cow position: | chr10:13311687-13311920 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 6, 20 |
| Conread position: | 248-464 |
| Cow position: | chr10:54848735-54848944 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 193, 129 |
| Conread position: | 248-472 |
| Cow position: | chr10:23128033-23127806 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 53, 136 |
| Conread position: | 251-471 |
| Cow position: | chr10:24871121-24871345 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 36 |
| Conread position: | 252-468 |
| Cow position: | chr10:4184153-4184374 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 132 |
| Conread position: | 300-468 |
| Cow position: | chr10:58149161-58148999 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 6, 81 |
| Conread position: | 300-472 |
| Cow position: | chr10:19679107-19679280 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 141, 77 |
| Conread position: | 302-472 |
| Cow position: | chr10:58066178-58066013 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
Show alignments to all cow chromosomes.