Cow genome map
| Conread name: | rgul0101_g23.y1 |
| Conread position: | 1-161 |
| Cow position: | chr11:4060794-4060634 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-194 |
| Cow position: | chr11:17863014-17862824 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 1-227 |
| Cow position: | chr11:40133641-40133416 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 23 |
| Conread position: | 209-437 |
| Cow position: | chr11:372785-372559 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 21, 12 |
| Conread position: | 214-470 |
| Cow position: | chr11:62742717-62742467 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 7 |
| Conread position: | 236-472 |
| Cow position: | chr11:69977918-69978148 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 52 |
| Conread position: | 236-473 |
| Cow position: | chr11:2084090-2084331 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 53 |
| Conread position: | 237-472 |
| Cow position: | chr11:66572547-66572309 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 47, 11 |
| Conread position: | 238-472 |
| Cow position: | chr11:61454564-61454320 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 239-471 |
| Cow position: | chr11:4207261-4207493 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 67 |
| Conread position: | 241-472 |
| Cow position: | chr11:6233927-6233695 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 143 |
| Conread position: | 241-473 |
| Cow position: | chr11:15772760-15772529 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 138 |
| Conread position: | 242-383 |
| Cow position: | chr11:83230447-83230302 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 242-390 |
| Cow position: | chr11:22747374-22747224 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 242-467 |
| Cow position: | chr11:80564246-80564475 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 60 |
| Conread position: | 242-468 |
| Cow position: | chr11:46998934-46999165 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 37, 140 |
| Conread position: | 242-473 |
| Cow position: | chr11:62789083-62789311 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 154 |
| Conread position: | 243-378 |
| Cow position: | chr11:7590146-7590282 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 243-473 |
| Cow position: | chr11:63999134-63998906 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 9, 134 |
| Conread position: | 244-404 |
| Cow position: | chr11:36658864-36658702 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 53 |
| Conread position: | 245-468 |
| Cow position: | chr11:21844176-21843960 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 17, 34 |
| Conread position: | 248-472 |
| Cow position: | chr11:66188357-66188138 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 119 |
| Conread position: | 251-472 |
| Cow position: | chr11:53778579-53778803 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 50, 133 |
| Conread position: | 251-474 |
| Cow position: | chr11:53717844-53717606 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 188 |
| Conread position: | 261-468 |
| Cow position: | chr11:8437721-8437511 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 40, 185 |
| Conread position: | 300-468 |
| Cow position: | chr11:67312796-67312964 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 82, 144 |
| Conread position: | 304-471 |
| Cow position: | chr11:49210802-49210635 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 137, 62 |
Show alignments to all cow chromosomes.