Cow genome map
| Conread name: | rgul0101_g23.y1 |
| Conread position: | 1-180 |
| Cow position: | chr13:12572210-12572034 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 148 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 1-198 |
| Cow position: | chr13:16270729-16270531 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 1-215 |
| Cow position: | chr13:7365688-7365901 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 1-221 |
| Cow position: | chr13:46428172-46428393 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 0 |
| Conread position: | 1-225 |
| Cow position: | chr13:41807505-41807284 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 231-462 |
| Cow position: | chr13:38872919-38873160 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 13, 61 |
| Conread position: | 235-472 |
| Cow position: | chr13:15997056-15996823 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 17, 126 |
| Conread position: | 236-472 |
| Cow position: | chr13:52055573-52055806 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 63, 5 |
| Conread position: | 238-472 |
| Cow position: | chr13:46516079-46515846 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 160 |
| Conread position: | 239-472 |
| Cow position: | chr13:14063503-14063734 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 146 |
| Conread position: | 241-472 |
| Cow position: | chr13:6183404-6183644 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 242-471 |
| Cow position: | chr13:37621345-37621587 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 242-471 |
| Cow position: | chr13:45023197-45023435 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 242-472 |
| Cow position: | chr13:62008122-62007894 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 10, 139 |
| Conread position: | 243-458 |
| Cow position: | chr13:15083673-15083462 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 9, 58 |
| Conread position: | 243-468 |
| Cow position: | chr13:20271212-20271440 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 9, 88 |
| Conread position: | 243-472 |
| Cow position: | chr13:9265816-9266061 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 243-472 |
| Cow position: | chr13:13775230-13775466 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 30, 55 |
| Conread position: | 243-472 |
| Cow position: | chr13:15192874-15193102 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 9, 140 |
| Conread position: | 243-472 |
| Cow position: | chr13:25941250-25941475 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 69, 115 |
| Conread position: | 243-473 |
| Cow position: | chr13:13089039-13088818 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 9, 128 |
| Conread position: | 244-468 |
| Cow position: | chr13:6926529-6926303 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 34, 154 |
| Conread position: | 244-472 |
| Cow position: | chr13:7076268-7076027 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 244-472 |
| Cow position: | chr13:18166745-18166519 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 141 |
| Conread position: | 244-473 |
| Cow position: | chr13:37592933-37593160 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 8, 150 |
| Conread position: | 245-472 |
| Cow position: | chr13:21127329-21127554 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 136 |
| Conread position: | 245-472 |
| Cow position: | chr13:42200631-42200407 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 7, 140 |
| Conread position: | 251-468 |
| Cow position: | chr13:6486246-6486462 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 36 |
| Conread position: | 251-468 |
| Cow position: | chr13:16908222-16908004 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 133 |
| Conread position: | 251-472 |
| Cow position: | chr13:32017507-32017729 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 50, 107 |
| Conread position: | 261-468 |
| Cow position: | chr13:19022265-19022055 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 39, 8 |
| Conread position: | 265-468 |
| Cow position: | chr13:9900143-9899937 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 120, 18 |
| Conread position: | 266-476 |
| Cow position: | chr13:53619987-53619783 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 175, 28 |
| Conread position: | 278-473 |
| Cow position: | chr13:6113552-6113746 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 300-468 |
| Cow position: | chr13:37803844-37803670 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 300-472 |
| Cow position: | chr13:14544088-14543922 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 6, 81 |
| Conread position: | 300-472 |
| Cow position: | chr13:17619844-17619665 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 304-473 |
| Cow position: | chr13:28081670-28081502 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 144, 82 |
| Conread position: | 305-472 |
| Cow position: | chr13:26422998-26422824 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 306-472 |
| Cow position: | chr13:18215312-18215145 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 86, 70 |
Show alignments to all cow chromosomes.