Cow genome map
| Conread name: | rgul0101_g23.y1 |
| Conread position: | 1-203 |
| Cow position: | chr17:22563464-22563662 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 53, 124 |
| Conread position: | 1-227 |
| Cow position: | chr17:1568901-1568677 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 236-468 |
| Cow position: | chr17:20993032-20992802 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 16, 56 |
| Conread position: | 237-473 |
| Cow position: | chr17:18934267-18934497 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 153 |
| Conread position: | 238-472 |
| Cow position: | chr17:20884530-20884765 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 14, 149 |
| Conread position: | 239-468 |
| Cow position: | chr17:11912496-11912269 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 6, 146 |
| Conread position: | 241-460 |
| Cow position: | chr17:11224115-11224338 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 141, 75 |
| Conread position: | 241-467 |
| Cow position: | chr17:40771846-40772065 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 14, 95 |
| Conread position: | 241-469 |
| Cow position: | chr17:5900381-5900618 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 10 |
| Conread position: | 241-473 |
| Cow position: | chr17:30728515-30728748 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 166 |
| Conread position: | 242-472 |
| Cow position: | chr17:7810744-7810506 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 242-472 |
| Cow position: | chr17:36814372-36814605 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 143 |
| Conread position: | 242-474 |
| Cow position: | chr17:27440187-27440418 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 134 |
| Conread position: | 243-470 |
| Cow position: | chr17:26230966-26231203 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 45 |
| Conread position: | 243-472 |
| Cow position: | chr17:5011850-5012081 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 9, 150 |
| Conread position: | 243-472 |
| Cow position: | chr17:21806440-21806209 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 142 |
| Conread position: | 243-476 |
| Cow position: | chr17:32419104-32418873 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 9, 142 |
| Conread position: | 243-476 |
| Cow position: | chr17:36791148-36791368 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 9, 42 |
| Conread position: | 244-388 |
| Cow position: | chr17:9911773-9911918 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 63 |
| Conread position: | 244-458 |
| Cow position: | chr17:949988-950201 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 8, 138 |
| Conread position: | 244-472 |
| Cow position: | chr17:1562767-1562551 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 8, 53 |
| Conread position: | 244-472 |
| Cow position: | chr17:25189303-25189527 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 244-473 |
| Cow position: | chr17:21039570-21039797 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 46 |
| Conread position: | 246-473 |
| Cow position: | chr17:21325347-21325585 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 251-472 |
| Cow position: | chr17:27058536-27058309 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 252-472 |
| Cow position: | chr17:20848545-20848768 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 46, 138 |
| Conread position: | 262-472 |
| Cow position: | chr17:21466231-21466018 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 22, 118 |
| Conread position: | 262-473 |
| Cow position: | chr17:32333059-32332851 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 39, 122 |
| Conread position: | 299-468 |
| Cow position: | chr17:5344690-5344855 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 300-471 |
| Cow position: | chr17:25139336-25139514 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 300-473 |
| Cow position: | chr17:21718923-21718756 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 142, 94 |
| Conread position: | 301-472 |
| Cow position: | chr17:13297455-13297625 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 107, 61 |
| Conread position: | 304-471 |
| Cow position: | chr17:9078143-9077974 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 106, 90 |
| Conread position: | 304-473 |
| Cow position: | chr17:24895151-24895318 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 305-473 |
| Cow position: | chr17:3467831-3467992 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 125, 75 |
| Conread position: | 313-473 |
| Cow position: | chr17:35051701-35051861 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 128, 67 |
Show alignments to all cow chromosomes.