Cow genome map
| Conread name: | rgul0101_g23.y1 |
| Conread position: | 1-189 |
| Cow position: | chr18:51679665-51679484 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-203 |
| Cow position: | chr18:51692277-51692077 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 1-210 |
| Cow position: | chr18:2609521-2609312 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 1-211 |
| Cow position: | chr18:37692742-37692532 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-230 |
| Cow position: | chr18:2853245-2853017 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 2-200 |
| Cow position: | chr18:50225141-50224946 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 26-226 |
| Cow position: | chr18:48300896-48300701 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 230-400 |
| Cow position: | chr18:35367268-35367094 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 230-472 |
| Cow position: | chr18:30341255-30341016 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 18, 65 |
| Conread position: | 235-473 |
| Cow position: | chr18:42479656-42479413 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 17, 150 |
| Conread position: | 237-468 |
| Cow position: | chr18:35889163-35888926 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 16, 65 |
| Conread position: | 237-472 |
| Cow position: | chr18:52251926-52251688 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 149 |
| Conread position: | 238-448 |
| Cow position: | chr18:48961867-48962079 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 14, 154 |
| Conread position: | 238-472 |
| Cow position: | chr18:23162826-23163060 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 238-472 |
| Cow position: | chr18:37023620-37023371 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 53 |
| Conread position: | 238-475 |
| Cow position: | chr18:2592231-2591991 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 163 |
| Conread position: | 239-468 |
| Cow position: | chr18:9066632-9066862 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 13, 136 |
| Conread position: | 241-384 |
| Cow position: | chr18:56172074-56171930 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 241-473 |
| Cow position: | chr18:31557224-31556990 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 21, 152 |
| Conread position: | 241-473 |
| Cow position: | chr18:49038398-49038621 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 144 |
| Conread position: | 242-475 |
| Cow position: | chr18:17391056-17390821 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 10, 83 |
| Conread position: | 243-400 |
| Cow position: | chr18:30586283-30586128 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 9, 138 |
| Conread position: | 243-472 |
| Cow position: | chr18:3211816-3212046 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 9, 142 |
| Conread position: | 244-468 |
| Cow position: | chr18:33158882-33159105 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 11, 137 |
| Conread position: | 246-473 |
| Cow position: | chr18:1954648-1954413 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 6, 180 |
| Conread position: | 246-473 |
| Cow position: | chr18:4556225-4555997 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 6, 157 |
| Conread position: | 248-471 |
| Cow position: | chr18:18369415-18369184 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 48, 163 |
| Conread position: | 251-468 |
| Cow position: | chr18:4851530-4851323 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 31, 10 |
| Conread position: | 272-472 |
| Cow position: | chr18:41702805-41703000 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 113 |
| Conread position: | 300-468 |
| Cow position: | chr18:19962144-19961974 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 85, 100 |
| Conread position: | 300-468 |
| Cow position: | chr18:41724818-41724652 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 300-473 |
| Cow position: | chr18:12270501-12270679 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 300-475 |
| Cow position: | chr18:33896418-33896245 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 302-471 |
| Cow position: | chr18:2776893-2776725 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 139, 75 |
| Conread position: | 304-471 |
| Cow position: | chr18:2773388-2773222 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 137, 76 |
| Conread position: | 306-471 |
| Cow position: | chr18:35454663-35454489 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
Show alignments to all cow chromosomes.