Cow genome map
| Conread name: | rgul0101_g23.y1 |
| Conread position: | 1-205 |
| Cow position: | chr19:15842926-15842718 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 1-209 |
| Cow position: | chr19:9543157-9542946 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 1-227 |
| Cow position: | chr19:42241074-42240847 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 57, 207 |
| Conread position: | 223-468 |
| Cow position: | chr19:43372975-43373232 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 230-472 |
| Cow position: | chr19:11194819-11194576 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 13, 155 |
| Conread position: | 236-472 |
| Cow position: | chr19:41024178-41024409 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 142 |
| Conread position: | 237-473 |
| Cow position: | chr19:47453386-47453624 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 148 |
| Conread position: | 238-472 |
| Cow position: | chr19:49290498-49290270 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 239-400 |
| Cow position: | chr19:15092176-15092011 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 241-468 |
| Cow position: | chr19:7637276-7637051 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 51, 143 |
| Conread position: | 241-468 |
| Cow position: | chr19:23304529-23304305 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 141 |
| Conread position: | 241-471 |
| Cow position: | chr19:4987807-4987579 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 142 |
| Conread position: | 241-471 |
| Cow position: | chr19:23378635-23378864 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 143 |
| Conread position: | 241-472 |
| Cow position: | chr19:729784-729560 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 11, 87 |
| Conread position: | 241-472 |
| Cow position: | chr19:43058493-43058726 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 41, 48 |
| Conread position: | 242-371 |
| Cow position: | chr19:43441128-43441261 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 242-468 |
| Cow position: | chr19:34166330-34166552 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 47 |
| Conread position: | 242-469 |
| Cow position: | chr19:32506160-32505923 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 35, 174 |
| Conread position: | 242-469 |
| Cow position: | chr19:34758043-34757807 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 10, 173 |
| Conread position: | 242-471 |
| Cow position: | chr19:2221116-2220885 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 151 |
| Conread position: | 242-473 |
| Cow position: | chr19:17354817-17355048 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 11, 126 |
| Conread position: | 242-473 |
| Cow position: | chr19:26269269-26269036 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 10, 35 |
| Conread position: | 243-441 |
| Cow position: | chr19:1664230-1664028 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 9, 145 |
| Conread position: | 243-472 |
| Cow position: | chr19:15887360-15887128 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 142 |
| Conread position: | 243-473 |
| Cow position: | chr19:21199099-21199339 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 244-472 |
| Cow position: | chr19:26167951-26167727 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 8, 134 |
| Conread position: | 244-472 |
| Cow position: | chr19:30007153-30007373 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 8, 103 |
| Conread position: | 245-472 |
| Cow position: | chr19:12698282-12698505 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 8, 153 |
| Conread position: | 245-472 |
| Cow position: | chr19:47185119-47184892 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 7, 69 |
| Conread position: | 245-472 |
| Cow position: | chr19:53378663-53378888 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 137 |
| Conread position: | 245-473 |
| Cow position: | chr19:24956275-24956054 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 7, 127 |
| Conread position: | 246-473 |
| Cow position: | chr19:4587775-4587539 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 6, 43 |
| Conread position: | 261-459 |
| Cow position: | chr19:41584948-41585147 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 17, 117 |
| Conread position: | 264-473 |
| Cow position: | chr19:44572065-44572277 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 24 |
| Conread position: | 273-474 |
| Cow position: | chr19:30227515-30227712 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 33, 21 |
| Conread position: | 300-468 |
| Cow position: | chr19:15076179-15076007 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 6, 111 |
| Conread position: | 300-472 |
| Cow position: | chr19:14421915-14421740 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 95, 54 |
| Conread position: | 300-473 |
| Cow position: | chr19:2358093-2358267 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 106, 38 |
| Conread position: | 300-473 |
| Cow position: | chr19:53189833-53189661 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 138, 80 |
| Conread position: | 304-468 |
| Cow position: | chr19:51637066-51637229 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 139, 70 |
| Conread position: | 310-475 |
| Cow position: | chr19:13766128-13765956 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
Show alignments to all cow chromosomes.