Cow genome map
| Conread name: | rgul0101_g23.y1 |
| Conread position: | 1-179 |
| Cow position: | chr28:13692968-13693146 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 62, 72 |
| Conread position: | 1-194 |
| Cow position: | chr28:25804360-25804553 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-203 |
| Cow position: | chr28:13889506-13889304 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-226 |
| Cow position: | chr28:17314884-17315108 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 0 |
| Conread position: | 1-227 |
| Cow position: | chr28:11787470-11787248 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 211-472 |
| Cow position: | chr28:4881300-4881045 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 19, 10 |
| Conread position: | 230-473 |
| Cow position: | chr28:11828989-11828754 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 8 |
| Conread position: | 237-389 |
| Cow position: | chr28:19026035-19025877 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 237-473 |
| Cow position: | chr28:3726240-3726003 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 45, 152 |
| Conread position: | 238-472 |
| Cow position: | chr28:20759730-20759489 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 14, 100 |
| Conread position: | 241-471 |
| Cow position: | chr28:18770059-18770290 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 135, 204 |
| Conread position: | 241-472 |
| Cow position: | chr28:7698004-7697775 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 140 |
| Conread position: | 241-473 |
| Cow position: | chr28:21868431-21868662 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 14, 48 |
| Conread position: | 242-475 |
| Cow position: | chr28:17739801-17740032 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 64, 139 |
| Conread position: | 243-461 |
| Cow position: | chr28:4045825-4046037 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 243-472 |
| Cow position: | chr28:27161350-27161112 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 89 |
| Conread position: | 243-473 |
| Cow position: | chr28:9636481-9636252 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 142 |
| Conread position: | 254-472 |
| Cow position: | chr28:10977829-10978042 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 114 |
| Conread position: | 261-473 |
| Cow position: | chr28:4158950-4159169 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 261-473 |
| Cow position: | chr28:5805666-5805867 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 269-467 |
| Cow position: | chr28:28501236-28501440 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 104 |
| Conread position: | 304-472 |
| Cow position: | chr28:16200701-16200536 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 137, 84 |
| Conread position: | 304-473 |
| Cow position: | chr28:29500442-29500612 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 139, 76 |
Show alignments to all cow chromosomes.