Cow genome map
| Conread name: | rgul0101_g23.y1 |
| Conread position: | 1-141 |
| Cow position: | chr4:53544640-53544780 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-197 |
| Cow position: | chr4:53316858-53316662 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-203 |
| Cow position: | chr4:61625406-61625208 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 159 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 1-222 |
| Cow position: | chr4:39457848-39458068 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 1-247 |
| Cow position: | chr4:14142504-14142737 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 200-400 |
| Cow position: | chr4:3268437-3268237 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 8 |
| Conread position: | 211-471 |
| Cow position: | chr4:2099561-2099822 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 41, 10 |
| Conread position: | 217-371 |
| Cow position: | chr4:22196271-22196118 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 35, 14 |
| Conread position: | 230-441 |
| Cow position: | chr4:12004169-12004376 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 151 |
| Conread position: | 230-472 |
| Cow position: | chr4:22073371-22073126 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 22, 67 |
| Conread position: | 238-390 |
| Cow position: | chr4:65650171-65650018 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 239-475 |
| Cow position: | chr4:54927480-54927236 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 146 |
| Conread position: | 241-472 |
| Cow position: | chr4:51769070-51769296 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 241-473 |
| Cow position: | chr4:34630861-34631099 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 147 |
| Conread position: | 242-441 |
| Cow position: | chr4:45775375-45775172 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 143 |
| Conread position: | 242-448 |
| Cow position: | chr4:36893322-36893533 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 155 |
| Conread position: | 242-466 |
| Cow position: | chr4:45706007-45706222 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 46 |
| Conread position: | 242-467 |
| Cow position: | chr4:19408034-19407805 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 10, 93 |
| Conread position: | 242-468 |
| Cow position: | chr4:26012360-26012599 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 97 |
| Conread position: | 242-468 |
| Cow position: | chr4:26830666-26830905 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 10, 97 |
| Conread position: | 242-472 |
| Cow position: | chr4:12591251-12591029 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 10, 143 |
| Conread position: | 242-473 |
| Cow position: | chr4:59002176-59001946 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 10, 142 |
| Conread position: | 243-460 |
| Cow position: | chr4:28753597-28753806 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 243-467 |
| Cow position: | chr4:23509560-23509777 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 19, 139 |
| Conread position: | 243-468 |
| Cow position: | chr4:13222220-13221993 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 53 |
| Conread position: | 243-468 |
| Cow position: | chr4:19501127-19500901 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 58, 136 |
| Conread position: | 243-472 |
| Cow position: | chr4:19584680-19584905 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 9, 40 |
| Conread position: | 243-473 |
| Cow position: | chr4:19431732-19431498 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 128 |
| Conread position: | 244-472 |
| Cow position: | chr4:45636131-45636363 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 8, 62 |
| Conread position: | 244-473 |
| Cow position: | chr4:65919576-65919810 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 244-475 |
| Cow position: | chr4:54524374-54524136 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 8, 79 |
| Conread position: | 245-466 |
| Cow position: | chr4:29805404-29805184 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 7, 136 |
| Conread position: | 246-472 |
| Cow position: | chr4:37675585-37675818 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 6, 33 |
| Conread position: | 248-472 |
| Cow position: | chr4:37313140-37313358 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 251-468 |
| Cow position: | chr4:54191063-54191289 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 37, 180 |
| Conread position: | 253-399 |
| Cow position: | chr4:34983521-34983371 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 276-472 |
| Cow position: | chr4:23807951-23808150 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 106, 175 |
| Conread position: | 294-472 |
| Cow position: | chr4:46656148-46656325 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 101 |
| Conread position: | 300-472 |
| Cow position: | chr4:39010074-39010244 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 6, 72 |
| Conread position: | 300-472 |
| Cow position: | chr4:62794338-62794165 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 115, 80 |
| Conread position: | 304-471 |
| Cow position: | chr4:5132363-5132535 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 304-473 |
| Cow position: | chr4:501653-501478 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
Show alignments to all cow chromosomes.