Cow genome map
| Conread name: | rgul0101_g23.y1 |
| Conread position: | 1-141 |
| Cow position: | chr7:14081689-14081549 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-168 |
| Cow position: | chr7:53381500-53381669 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-195 |
| Cow position: | chr7:57209334-57209139 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-196 |
| Cow position: | chr7:19913013-19912818 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-199 |
| Cow position: | chr7:23554472-23554661 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-200 |
| Cow position: | chr7:7477254-7477062 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-203 |
| Cow position: | chr7:61652684-61652886 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 27, 44 |
| Conread position: | 1-226 |
| Cow position: | chr7:49750408-49750633 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 115, 207 |
| Conread position: | 1-227 |
| Cow position: | chr7:24767962-24767737 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 1-227 |
| Cow position: | chr7:40404776-40405000 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 1-227 |
| Cow position: | chr7:54478797-54478572 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 206, 0 |
| Conread position: | 211-383 |
| Cow position: | chr7:27283656-27283832 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 10 |
| Conread position: | 229-473 |
| Cow position: | chr7:11796904-11796661 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 147 |
| Conread position: | 230-377 |
| Cow position: | chr7:65122336-65122484 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 70 |
| Conread position: | 234-470 |
| Cow position: | chr7:32946073-32946305 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 237-473 |
| Cow position: | chr7:26263645-26263412 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 164 |
| Conread position: | 238-470 |
| Cow position: | chr7:64135457-64135228 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 239-400 |
| Cow position: | chr7:5199538-5199374 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 43, 49 |
| Conread position: | 241-390 |
| Cow position: | chr7:23090132-23089981 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 241-468 |
| Cow position: | chr7:6116354-6116130 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 141 |
| Conread position: | 241-468 |
| Cow position: | chr7:11015693-11015936 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 241-472 |
| Cow position: | chr7:51019791-51020021 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 41, 10 |
| Conread position: | 242-378 |
| Cow position: | chr7:23568722-23568583 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 36, 62 |
| Conread position: | 242-464 |
| Cow position: | chr7:39129593-39129368 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 45 |
| Conread position: | 242-471 |
| Cow position: | chr7:4720217-4719986 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 10, 141 |
| Conread position: | 242-471 |
| Cow position: | chr7:23636720-23636950 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 10 |
| Conread position: | 242-475 |
| Cow position: | chr7:33720048-33720279 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 40, 46 |
| Conread position: | 242-478 |
| Cow position: | chr7:9861750-9861507 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 131, 209 |
| Conread position: | 243-468 |
| Cow position: | chr7:29505128-29505349 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 142 |
| Conread position: | 243-472 |
| Cow position: | chr7:39838864-39838622 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 45 |
| Conread position: | 243-473 |
| Cow position: | chr7:11487659-11487434 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 71 |
| Conread position: | 244-389 |
| Cow position: | chr7:30931958-30931812 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 244-463 |
| Cow position: | chr7:15755431-15755212 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 34, 144 |
| Conread position: | 244-472 |
| Cow position: | chr7:25393319-25393540 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 39 |
| Conread position: | 245-378 |
| Cow position: | chr7:11176714-11176576 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 44 |
| Conread position: | 246-472 |
| Cow position: | chr7:31694622-31694390 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 36, 42 |
| Conread position: | 252-473 |
| Cow position: | chr7:51685037-51685257 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 108 |
| Conread position: | 273-471 |
| Cow position: | chr7:25263416-25263610 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 19 |
| Conread position: | 300-468 |
| Cow position: | chr7:25860132-25859965 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 12, 101 |
| Conread position: | 300-472 |
| Cow position: | chr7:53806748-53806568 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 300-472 |
| Cow position: | chr7:59149583-59149754 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 318-473 |
| Cow position: | chr7:40656390-40656229 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
Show alignments to all cow chromosomes.