Cow genome map
| Conread name: | rgul0101_g23.y1 |
| Conread position: | 1-197 |
| Cow position: | chr8:35291534-35291338 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 156 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-213 |
| Cow position: | chr8:34821658-34821442 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-225 |
| Cow position: | chr8:27287737-27287513 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 111 |
| Conread position: | 1-230 |
| Cow position: | chr8:38249249-38249025 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 210, 137 |
| Conread position: | 1-248 |
| Cow position: | chr8:47751450-47751207 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 215-471 |
| Cow position: | chr8:16061026-16061282 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 215-473 |
| Cow position: | chr8:11927091-11927349 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 170, 15 |
| Conread position: | 230-470 |
| Cow position: | chr8:42794356-42794105 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 158 |
| Conread position: | 230-472 |
| Cow position: | chr8:33125465-33125701 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 61 |
| Conread position: | 230-473 |
| Cow position: | chr8:37672005-37672258 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 237-472 |
| Cow position: | chr8:5468115-5467873 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 237-472 |
| Cow position: | chr8:38893989-38894229 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 64, 212 |
| Conread position: | 237-473 |
| Cow position: | chr8:46235674-46235917 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 241-389 |
| Cow position: | chr8:18647376-18647230 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 144, 10 |
| Conread position: | 241-464 |
| Cow position: | chr8:21911616-21911845 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 48 |
| Conread position: | 241-468 |
| Cow position: | chr8:21858732-21858504 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 11, 52 |
| Conread position: | 241-469 |
| Cow position: | chr8:16144110-16144340 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 11, 152 |
| Conread position: | 241-472 |
| Cow position: | chr8:29958386-29958608 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 11, 60 |
| Conread position: | 241-472 |
| Cow position: | chr8:35504250-35504011 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 11, 117 |
| Conread position: | 242-470 |
| Cow position: | chr8:43439593-43439814 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 10, 48 |
| Conread position: | 242-472 |
| Cow position: | chr8:6224453-6224232 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 10, 117 |
| Conread position: | 242-472 |
| Cow position: | chr8:23179560-23179321 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 10, 210 |
| Conread position: | 242-472 |
| Cow position: | chr8:24328871-24328637 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 54 |
| Conread position: | 242-472 |
| Cow position: | chr8:46743331-46743105 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 10, 155 |
| Conread position: | 243-472 |
| Cow position: | chr8:20783280-20783052 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 12, 140 |
| Conread position: | 243-472 |
| Cow position: | chr8:41722203-41721981 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 63, 8 |
| Conread position: | 244-389 |
| Cow position: | chr8:50335537-50335391 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 245-472 |
| Cow position: | chr8:41905635-41905410 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 7, 56 |
| Conread position: | 245-472 |
| Cow position: | chr8:41914543-41914318 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 7, 56 |
| Conread position: | 247-473 |
| Cow position: | chr8:42112838-42112605 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 37, 127 |
| Conread position: | 251-472 |
| Cow position: | chr8:19784853-19785068 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 115, 130 |
| Conread position: | 251-472 |
| Cow position: | chr8:21069983-21069754 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 251-472 |
| Cow position: | chr8:25388131-25388364 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 251-472 |
| Cow position: | chr8:45232545-45232778 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 134, 21 |
| Conread position: | 258-472 |
| Cow position: | chr8:49305751-49305538 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 125 |
| Conread position: | 297-473 |
| Cow position: | chr8:3887373-3887542 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 300-471 |
| Cow position: | chr8:36034925-36034756 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 6, 92 |
| Conread position: | 300-472 |
| Cow position: | chr8:19010793-19010613 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 300-472 |
| Cow position: | chr8:29173253-29173417 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 300-472 |
| Cow position: | chr8:53641458-53641632 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 5, 65 |
| Conread position: | 313-468 |
| Cow position: | chr8:10639792-10639947 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 130, 43 |
Show alignments to all cow chromosomes.