Cow genome map
| Conread name: | rgul0101_g23.y1 |
| Conread position: | 1-197 |
| Cow position: | chr9:56861834-56861638 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 27, 47 |
| Conread position: | 1-205 |
| Cow position: | chr9:2618438-2618234 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-212 |
| Cow position: | chr9:23540648-23540854 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-215 |
| Cow position: | chr9:25959326-25959115 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 42, 53 |
| Conread position: | 1-227 |
| Cow position: | chr9:22755582-22755366 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 2-212 |
| Cow position: | chr9:7844341-7844132 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 30, 46 |
| Conread position: | 207-470 |
| Cow position: | chr9:2037523-2037268 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 45, 14 |
| Conread position: | 209-472 |
| Cow position: | chr9:33598080-33597803 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 12 |
| Conread position: | 211-458 |
| Cow position: | chr9:38846246-38846497 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 230-472 |
| Cow position: | chr9:54677325-54677087 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 218, 18 |
| Conread position: | 231-472 |
| Cow position: | chr9:50310695-50310933 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 10, 90 |
| Conread position: | 235-473 |
| Cow position: | chr9:39011405-39011638 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 62, 5 |
| Conread position: | 236-473 |
| Cow position: | chr9:26279105-26279344 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 61, 163 |
| Conread position: | 237-466 |
| Cow position: | chr9:33218890-33219121 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 238-472 |
| Cow position: | chr9:9443541-9443772 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 14, 195 |
| Conread position: | 241-393 |
| Cow position: | chr9:1350103-1349950 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 65, 53 |
| Conread position: | 241-472 |
| Cow position: | chr9:12786414-12786646 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 60, 143 |
| Conread position: | 241-472 |
| Cow position: | chr9:26477276-26477042 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 58 |
| Conread position: | 241-473 |
| Cow position: | chr9:25583888-25583660 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 148 |
| Conread position: | 242-468 |
| Cow position: | chr9:41283073-41282846 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 59, 142 |
| Conread position: | 242-472 |
| Cow position: | chr9:12337960-12337730 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 142 |
| Conread position: | 242-473 |
| Cow position: | chr9:47214486-47214721 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 139 |
| Conread position: | 242-475 |
| Cow position: | chr9:5104344-5104583 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 13, 80 |
| Conread position: | 243-402 |
| Cow position: | chr9:38289268-38289429 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 243-441 |
| Cow position: | chr9:20416452-20416651 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 243-472 |
| Cow position: | chr9:8834076-8834301 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 160, 49 |
| Conread position: | 247-400 |
| Cow position: | chr9:42586503-42586660 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 247-473 |
| Cow position: | chr9:27345531-27345760 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 54, 123 |
| Conread position: | 251-390 |
| Cow position: | chr9:10308952-10309091 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 133, 67 |
| Conread position: | 251-472 |
| Cow position: | chr9:13670683-13670466 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 134 |
| Conread position: | 264-472 |
| Cow position: | chr9:21460118-21460323 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 117 |
| Conread position: | 276-472 |
| Cow position: | chr9:8468076-8467889 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 5, 17 |
| Conread position: | 300-468 |
| Cow position: | chr9:38624627-38624790 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 6, 81 |
| Conread position: | 300-471 |
| Cow position: | chr9:34286795-34286629 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 141, 80 |
| Conread position: | 304-472 |
| Cow position: | chr9:23840402-23840575 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 306-472 |
| Cow position: | chr9:53323794-53323957 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 142, 74 |
Show alignments to all cow chromosomes.